NONHSAT015580
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015580 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1860 nt |
Genomic location |
chr10-:91675246..91717130 |
Exon number |
4 |
Exons |
91675246..91676528,91715632..91715760,91715972..91716194,91716906..91717130 |
Genome context |
|
Sequence |
000001 AAATCCAAAA TGCTCTAAAG TGCAAAACTT TTTGGGCATC AACATGACTT TTAAAAGAAA TGCTCATTGG AGCATTTTGA 000080
000081 ATTTCAAATT TTCAGATTAG TGATGCTCAG CTAGTAATAT TACTGTAAAT ATTCCAAAAT CTGAAAAAGT CTGAAACATC 000160 000161 TCTGGTCTCA AGCATTTCAG ATAAGGGACA CTCGATCTAC CAACAAAGGA GAGAGCCCCT TGAAAAGGGC ACTCTGAATC 000240 000241 ACTCTTCTGG TGAAGATCTC TGGGAGTTAC ATGCAAGCGG TGGGCCTGGG CCCATTTCCA CATCCCACAA AGAGTGCATT 000320 000321 TACTTTGTGT ATCCAGAAGA GCAAAACTCC CAACTCTACT GCTTTGTTTT CAAACGGACA GCCAAGCATT CGATGTCTTC 000400 000401 AGCTTCACTC TCTACTTTGT GCTTGGGTTC CATTTCTGGT TCATATAGTC AAGGTTTATT GAGCACAATA TGATGGTGTA 000480 000481 GGCATCTTTG GAGATATGCT ATCTGCAGGT TCAGCTTTGG AGATTCAGAA GTGACATGCA CATGCCTCTG ACACTCTCAT 000560 000561 GGAGTTCACA GTTGGAGTGA CCTCACAGTA CTCAGAGGCA CAACACTCTG GAGAGGATGT CCTAATGCAA TAAAGAATTT 000640 000641 TCAGAGAGCA AGTGACTGCT ACAATTCCAT GGGTAGAGAG GGCAAGAGAG GCTGCTTGTT AATGCCAAAC AGGAAAGTCA 000720 000721 TCAAAATTCT TTCTCTTCTG CCCTCCAGGG AAACAGCCCA CTGCTAACCA CCAAGTTTTG CAAGATATTC TTTTGTTTCT 000800 000801 TGAAAATTTA TTATTCCCCC CATCAGCAGC TCTAGCTGAA GTAATCTCAA TTCTCTTAAC CTTTCTTTAG AAGGTCTATT 000880 000881 TAATCCATTT TTATTGCTCT CCTCTGAGCA CTCACTAAGT TTGTTAGACT TTATTCAATC TTGAATTGGA CAAAGTACTT 000960 000961 TAATAAGGGT TGCCTCCCAC TGCTCCAGGA ACAGGCAAAG GTAATGTCCT GATGGGGCAC TGGCATAGGA TATTGCATGT 001040 001041 GGAAGCACTT TTGGAACTCT TAAGCAGCCC CCAAATGGAG CAGATGATGA TTAGACTGCA CATCTCAGAC TGAGCTCCTC 001120 001121 ATTCCCAAAA AGAATGAAAA AGAAATGATT GTACCATTTA TTCATGTGTA CCTTCAACAA AAATGTATTG TGCAATCACT 001200 001201 TTGTGCAAGA TACTGTACTA GGCACTTAGG ATATAATGAT AAATAAGATA TGGCCTCTAT TCAGTAGAAT ATAAAGGCAT 001280 001281 TGGTATACCC CCCCCAAAAA AAATTTTTGA TTGTAGACCC AGAAATATTC CAGATGTTTT TGCATATATC ATGTCATTCA 001360 001361 AGCTTGTCAT ATAACAAGCC CATTTGGAAG GTATTTTTAT TCCTAGTACA CAGAAGAAGA AACTGAAGCA CACCTATCTA 001440 001441 GAGTTGTGCT AAAGAAAAAC AAACATAAAT TTATTTAGCC AAATTGGAGT TTTACTGCTC TGCCTTATGT CTTCCTACCT 001520 001521 GCTTGTAGGA TGACACCTGT GCCTAAAGCA TCTTCAAGCT ACTTCCCACA GTGAAGGGCA TCCCCAACCC ACATTTCTCC 001600 001601 ACACTGTAGG GCAGGTCAGG GTTCCTCCCG CACCATCCAC TGAAAAAAGT TCTGGAACAG CTAAATCTCT GCTTTCAACA 001680 001681 TTCTGCTAAC ACTGCTGATC TTCTTGCAGG TTAGGAAATC CAATGCCCTA AAGAAATACA GACTTAGGCT AAAGAGCTGG 001760 001761 ATCTCTGGCT TACACAGATG TTCCTGAAAC GTTGAGCATG TTGTCTAACC TCTCTGTGTC TCATTGTCCC CATTTGTAAA 001840 001841 ATTGAGACAA TTGTACCTAC |
Predicted Small Protein
Name | NONHSAT015580_smProtein_668:766 |
Length | 33 |
Molecular weight | 3608.3776 |
Aromaticity | 0.0 |
Instability index | 47.78125 |
Isoelectric point | 10.3101196289 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0414237767179 |
Amino acid sequence | MGREGKRGCLLMPNRKVIKILSLLPSRETAHC |
Secondary structure | LLLLLLLLEELLLLHHHHHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |