NONHSAT015766
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT015766 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
4262 nt |
Genomic location |
chr10-:97512963..97849992 |
Exon number |
6 |
Exons |
97512963..97516471,97544783..97545002,97607149..97607242,97636275..97636417,97849023..97849064,97849739..97849992 |
Genome context |
|
Sequence |
000001 GACTCTGGCC GCGGCGATTC AATATATCCG GAAGCAACTG TCATGGCTGC TGTCAGTGAG GGCCCGTAAT GGAGATCGAG 000080
000081 TCAAGGGTTG CCCAGGGACA CTTAAGAGCC TTCGGCTTCA AGGAGGCCTC TCAAAGGACA AAGGATGAGA CTGCCTGGCG 000160 000161 GCAGAGTGCC CCCCACAATC GTAGGAACTG TGTCGCCGCG CTTCCCGTTA ACTTGCCGCT AAGTTTTTCT AGAAAAGTCG 000240 000241 CCCTTCTTGC CAGGGGTGTC CTATAGACTT TGTCATGGAG TGAAACAGAA ACAAATAATG GCCTGTCCAG AAGACAGCCA 000320 000321 AATACATCCT TCAAACAGAC TTCACTGCAG GAGACAGAGT GGATTCATCC TGTATTCTCC ATGTAGACTT CCATCTTCAT 000400 000401 GAGTACTCCA AGAAGATGGT TCAGTTGACT ATTGCAAAGG ATGAAAGCAT GGGTCCCTGA GAATTTCATT ACTTGCAACC 000480 000481 TGAATGGAAA AATCACTTGA AAGCATCATG TGTGAACGCT TTGGATACAA AAGAGATCAA TAGAGTTGGC CTGGAACAAG 000560 000561 AGATGCCCTT GAATGCAAGT TGTAACAACT GAGAGAAATT GCCCAGACAC TGCAACGGGA GTTGCCAACA AAGTAACAGA 000640 000641 GTCAGAGAAG AGCTGAGTCT TGGGAATGAA AAAGTGATGA GGGGATGACT TCCACAGTGG GTATCCGGTC ATTTGGGCTG 000720 000721 CTGCTCTGCC CTCATCAAAG TGATTTCCAC TCTAAGCCTT TGCTAATTTC ACAACAGGAA AGCATGCAAG AAATTCGAGA 000800 000801 ACAAAACAAA TCTACACGCA GAGCCCAGCA TCTTCAAGCA AACACCCTGA GGTACAGACC CGAGGCTAGA TGAGTCCGGA 000880 000881 CTGCAGATGA GGCAGCTGCC TCTTAAACTG CAAGGGGACT GAAAAAGTCA TTTGCCTCTA AAAAAACCAA CTCTGAATAC 000960 000961 AAATTGATAA TGAATATTCA TGAGCCCCTC CAGCTTGCTC TAGAGCCACC CTTGACTGCA ACCCTGGACT CTGCTTCCTA 001040 001041 AAAAGTTTCC CAAAGCTCTT TCTCTGCCTC CTCTCAGAAG GAAGAGGGTG GGAAAGTTCA TTCAGGGCTT TTTGCCTCCA 001120 001121 GCTTTCAAGT ACTTGCTTTT TGGTCTGGGC TTTTATTTTT CCTTCTATTT TTTTTTTCTT AAGGATTCAG ATCAAATCAA 001200 001201 TTTTGGTCTT ACCCTTTGTA TCTTCCATAA GTAGCAGCTT TTGTTTTCCT CCTCTTTCCT CGTCTTTCCC CCCCCCAGCC 001280 001281 TCTGCTTGCT GTGGTCCGTC TCCGTGAGAG AGGTCCTCAA GGAAACAGAG ATATAACAGA CCCTTGGGCT CGTGGGAGGG 001360 001361 GCTAAATTAG CCGGCCCCGT TTCGGAAGGA ACCTCAAACC CTGTCTTTTT CATTGACTAG AAAGGACAGA TTGACTGAGG 001440 001441 AGTCCAGCAG CTCATTTTCC TAAAGTTACT CGAAGCCTTT TCCAGGTTGT AATTTTTTGC ATCCTTGAAG CAATGTATAT 001520 001521 TCAAATCTCT CTCTCTTTCT CCCTTCTTCC CTCTCTCCCT TACTCCCTCC CTCTTCATCT CTCTCTCCCT CTCTTCGTTA 001600 001601 TAGAAATCCC TTTTTCTCCC TTGAAAAAGT CATCTCAGCT GCAAGCAAAA AAAGCTATTC CTTACTGCAA TTATGAAGCT 001680 001681 AGATAATAAG AAAGTTGTTA CCTTGAAACC CGCTCGAAAA ACTGAAAGTC AAGAACAGTT CTTCCCTCCC CATAAAGCCT 001760 001761 CTGGTCCCAT GACCAGCAAT CCTTTCTCAA GGCTCATTAG AGCAAAGAGC AACAGGTGAC CCAAGCGATG AGTTTCCTGC 001840 001841 AGGAGACGCT GCGTTATTGG TTGGAAGGCT GGGTGGAACC ACAGAGGAGC TGCTCAATGG GAACCGCTGC CTGGCTATGA 001920 001921 ATTGATGAAA GTCATCCACC ATTTCCCAAC TTTGACTTCC TACCTTTGAA GTCTAATGAG CATGAATTAC CACATCCAGA 002000 002001 CCGTCAAGAT TACCCCAATG TAGATGAGAG CCTGACCAAA TTATTTTTAA ACTGTGTAAC AAAATTATTT TGAAATCAAA 002080 002081 ACAAGGGCTA ATCCTTTGAA AGGAAGGTAA GTCCTCAAGT CCCAAGGCGA CTTGGCAGCT TCTCCCTCCA CAAGGCTGTT 002160 002161 GCAAACCTTA GCATTTCAGG TCTGAAAGAT ACCTCAGACA TTGAGTCTAA AAGAGGTTAG AGATGTGGAG AGGTTAAGCC 002240 002241 ACCTGCTCAT GCTCACATAC ATGGTCTCTC TTATTTGCTA CCATGTTCCC CAGCACCTAA TACAGTTTCT CTCACAGCAT 002320 002321 GGGCTCTCAA TAAATATTTG ATGAATGGTT GAAAAAAATG AATGAATTGC AGCAAAGCAG AAATGTAGAT CTGTTTTCCT 002400 002401 GTTTCCTAGT TCTTGATTTT TCTACATTGC TTGTCTGGCA TGTAAATTTG TATCTAAAGC CAGTTATACC ATATAAATCA 002480 002481 TTAAATTTGT GAGCCCGAAG GACTGTTTTG ACTCTATGTA GAAACTATAT TCTCCAGCGA GCTTTCAGTC ATACTTTAAT 002560 002561 AAGGACAAAG GATAACCTTT TAGTTTAGGC ATCTCTGTTA CTTTGCACGG TGCCACATGG TATATACTCA ATACATTTTT 002640 002641 TATACTTTAA TAAATTTGGA GCTGTTTAAC AATACTTTAT TTCTGAAATG CTTTATAGTT ATAGGATTTT GCATGTATGA 002720 002721 TAACAACTAA TTACACTGAA TGAAAGACTC AATGGATGTC TTCTCCCGAG TCAGTTTAGA CTACATCTCT AATAATGAAT 002800 002801 ATTGGTCTGA TATTCATCCT GTTATGATAA AACTGGTTTT TGGTGATATG ATGGGATTTT TTGTAAAAAC CAACAATTGG 002880 002881 TTTATGACTG CCTTTGTACT ATTGTTTTGG AGAGAAATTT GAAAAGAGCA TGTCCACAAA ATAGTGTGCG AATTACAGAA 002960 002961 TGGAAACCAA AACATCAAAG CTAGAAAGAG AAAAGAATGA TCAAAGGGAA GATCCAGAGT GGCTGAGGGG TAGGCAGGAG 003040 003041 AAACAGACAA ACAAGTACCT GAGCTTGTCA ATGAGAGACA CACTTTGGTG GGTGCTGTGG CAACGGTTCT CTACTTTATT 003120 003121 ACATTAGGAT ATTAGGTTCT TTTTTTTTTT TTTTTTTTGA GACAAGAGTT TTACTCTTGT CTCCCAGGCT GGAGTGCAAT 003200 003201 GGAGCCATCT CAGCTTACTG CACCCTCTGC CTCCCGGGTT CAAGTGATTC TCCTGCCTCT GCCTCCAAGT AGCTGGGATT 003280 003281 ACAGGCGCCC GCCACCTTGC CCAGCTAATT TGTGTATTTT TAGTAGAGAT GGGGTTTCAC CATGTTGGTC AGGCTGGTCT 003360 003361 CGAACTCCTG ACCTCAGGTG ATCCGCCCGC CTCAGCCTCC CAAAGTGCTG GGATTACAGG CGTGAGCCAC CATGCCTGGC 003440 003441 CTATTTTACT ACGTTCTTAC ATTCTTTTTT TTGAGACAGA GCCTCACTCT GTCATCCAGG CTGGAGTGCA GTGGCGTGAT 003520 003521 CTTGGCTCAC TGCAACCTCT GCCTCCCAGG TTCAAGTGAT TCTTGTGCCT CAGCCTCCCG CGTAACTGGG ATTATAGATG 003600 003601 CGCACCACTA AGCCTGGCTA ATTTTTGTAT TTTTAGTAGA GATTGGGTTT CACCATGTTG TCCAGGCTGG TCTCAAACTC 003680 003681 CTGGCCTCAA GTGATCCGCT TGCCTTGGCC TCCCAAAGTG CTAGGATTAC AGGTGTGAGC CACAGTGCCT AGCCACAGTT 003760 003761 CTCTATTTTA AACAAAATTA AAATTCAAGG TCACTTCAGT CATGTTGTAT CAGACGTTGT CGACAAAAGG TTACTTTGAC 003840 003841 AATTGTCTCA TTCTCTTTAC ATTTCATCAG GGAGAGAAAG AGTTAGTAAA AAGTAAATTG TTCTAGTACC CAACTTCTGG 003920 003921 TTTAACCAGG AGAGGTAAAA TCTCATTATA GTAACTAGCA CTTCATAAAT ATTTGAAGTT CATCCAAACT GAATATGGAG 004000 004001 TAATAGAAAC ATAGTTTTAA CCCCTAATTC ATATTACATG AGCCTTTTGA CAACATTTAA TGCTTTTTAT GGTAATATGC 004080 004081 TCTGTGCTAC AATTTAATCA CGTTGTCCAG GTTCGCACCC TCCTCAGCAT CATGAAAATA CTATGGTTAA GTATATATTA 004160 004161 TCACCAATTC ATACAAGAAT AATTATAAAA GAGATGGGAG TTTGTGTGTA TCTTTCTAAA GGCCTCAGAA TTTATCTTAA 004240 004241 AAAATAAATC GTCTTTCTCA AC |
Predicted Small Protein
Name | NONHSAT015766_smProtein_68:265 |
Length | 66 |
Molecular weight | 7287.3161 |
Aromaticity | 0.0615384615385 |
Instability index | 63.7861538462 |
Isoelectric point | 11.2343139648 |
Runs | 11 |
Runs residual | 0.0189423076923 |
Runs probability | 0.0484334601981 |
Amino acid sequence | MEIESRVAQGHLRAFGFKEASQRTKDETAWRQSAPHNRRNCVAALPVNLPLSFSRKVALL ARGVL |
Secondary structure | LLLHHHHHHHHHHHLLLLHHHHLLHHHHHHHHLLLLLLLLEELLLLLLLLLLHHHHHHHH HLLLL |
PRMN | - |
PiMo | - |