NONHSAT015848
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015848 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
2389 nt |
Genomic location |
chr10-:98912802..98915190 |
Exon number |
1 |
Exons |
98912802..98915190 |
Genome context |
|
Sequence |
000001 CTCCCTCCCT CCTTTACTCG AGTCCACCCT TCTCTTTGGA CATTGGTGCC TTGCACACAC CTGTGTTCCT TCCTGAGGAA 000080
000081 AATGACAACT TGGCTGCCTC CTTGGCCTGT GTCTGGGAAA CCTGGATCCC CCCTGGAATG GAAGGTGGCC TGGGAAGCAG 000160 000161 AAAGTCAAGG GTCAGGTGGT CCTGGGCTTT TCAAGGCATA ACTTTGGGTG GTTTAATTGT TCAGAGCCCA TTTCTCTTAC 000240 000241 CCATACATGG TAGGGCTAGT AGGAGTCTGA ACTGGGACTG TGCATGTAAC ATAACCAAGC CTGCAGCTGG CCCTCAGTGG 000320 000321 ATGTTCATCC ATCATGCCCC TGATAACTCA GGGTGAGCAA ATAGCCCCTC GGTGAAGCAG GTGCTCCTGT GCTTGATATC 000400 000401 TTGTCTGACA CATGTGGCCA TGAGGCAAGC AATGTCTCCC ACTGTTACTG CCAGCGAGAC AGGTTGGAAA GAGGAAGTGA 000480 000481 CTTCCcgaga gtcaggatga agccctctga ctcctaggcc cgccctcttc atggtttcat attttacagg agtcctagag 000560 000561 gaaaggacAT CTATATTTTA ATGAGTATTA AATAGCCAGA TTCTATAACC AAAGGCTGGC ACAAGAAGAT TAAATCAAGG 000640 000641 AGCAAAAAGC CATTGCAGAG GACAGCACTC TGTATGATAC CTGCTCTTGG CACCCTATGG GGCTGGGAGG CAGAAGCCTC 000720 000721 TAGACACATT GGGTGTCCTC ATTGCAGTGG TCCCAGGCCA GCTGCTTTCG GGAGGGGGCT GGTTGGCAGC CAACAGAGGG 000800 000801 ACTTCCAGGA GGGCAGTGGA AGTCTTGGTA GCCCTTTGGG GGGGTGTTTC TAGGCTCTAG AGCCAGAACT TCTCCCTAAC 000880 000881 ACTTACTGTC TTTTCTTTCC AGGCATCAGG TCCTTTACTC TCAGCAGGAA ACATTTCTCA TCCAGGAGCA TAGCAGGATT 000960 000961 TGGGTGAAGG CAGACTTTTC TTTAGCTTTC CCCTTGACAT TTCTTAACCT CATCTGTAAG CAAGGCATGC AAACCGAGAG 001040 001041 GACTCCTGCA GGGCTCTTGG AGGACTCCCA GGCAGTGTGC CCTGCTTAGT TTGCACTGAG GCCAAGGCAT TTGGTGGCCA 001120 001121 CCAGGTCACA TCTCAAAACG GGCACTGTCT GGGGGAAATG ATTCAACAAA CCTTATTTAT CTGGTTGTTC GTCCCTGGTG 001200 001201 TCTGGGCTTA CCGGGTTCTT CACCTTGGAG ATGGTTATAG GGAAGGATAG AGGAGCAAGT GTTTAAAGAT CTACTTGTTA 001280 001281 ATATTCTTCT AATATTACTG TGTACGCATC CGCCCTGCCC CATTCTATTG ACCTGAGCAC CTGGCATTCT AAAGTATCTC 001360 001361 TGTTAACTCC CCCAGTTGGT CTGGCCAAGG AGTACTCGGC ACGCTTGGTT CCAGAAACAG AATACCCTGC CGGCTGGTGA 001440 001441 TGGTAAAGGT AGAGGCGGGG TTTTGTAGGG GCACAGCTGG CAGGCTCCCA GGCTCCCAGA GCAGGAGGTG AGATCCAGCT 001520 001521 GGCCCTCCCA GGGACCTGCA CTGAGATGTG AGGGCCATTT CTCGTTATTT CTGAATATCT GCCTTATTGT CCTGCTCTTC 001600 001601 CCTGCAAACC AGTGTTCTAG GATCATCAGC AGCATCTCGA TTCCATCATG ACTCAGGTCA GCCATGGTGC CAATTTGCCT 001680 001681 CCTACTTCCT GTGACCTCGG AGCTCAGATC CACACAGCGT CTCAGGCCCC AACTCCGGGT TTCTGGGAGA GTGAATCTga 001760 001761 ttggcccatc ttaggtcaag aggtcacacc aggccagtga gctgttggca gggattgtgg gatccgctgg tgcagcaaca 001840 001841 ctatggtgcc cacactatct caggagctgg agtgggacct attcccttag aaggCAGTGC CTGGCATTCC TGTTCTCTCA 001920 001921 CTTGTTGACC TCCCCTTTGC TTTGTAGGGA TCTGTTACTA ATTCTTCCCA TCTGGAGCAA ATTATGGACT TTCATGCACA 002000 002001 GGCTGTTATG CTAAATCAGC ATGAAAATGG GTTTGAGAGA GACCAAATGT GCTGGGTAAG GCATGGTCAC CAAGTCTGTA 002080 002081 GGTGGTGGCG CAGCCCACAT TTCAGTTGAT TTTGTCTGTG TGGCCTCCAG AAGTTAAAAT CCTGTTAGGG GTTATTCTGC 002160 002161 ACGAATGTTT CCCCTGctgt gaggttagtc tgtctatttc tttcctatgc aggatctatg gctcagagag gtgatttgcc 002240 002241 ttggaccaca gagcagcttg acaatagggt tggaattaga caccaggcct tctAGGGGCC CTGaagagcc tgaaaatggt 002320 002321 cttaaacctt gacctaggaa tctcatattt gggcatctgc cctaaagaaa taataaagca tgagcacag |
Predicted Small Protein
Name | NONHSAT015848_smProtein_137:355 |
Length | 73 |
Molecular weight | 7887.9789 |
Aromaticity | 0.0972222222222 |
Instability index | 70.4541666667 |
Isoelectric point | 10.0820922852 |
Runs | 12 |
Runs residual | 0.0257502027575 |
Runs probability | 0.0350350350351 |
Amino acid sequence | MEGGLGSRKSRVRWSWAFQGITLGGLIVQSPFLLPIHGRASRSLNWDCACNITKPAAGPQ WMFIHHAPDNSG |
Secondary structure | LLLLLLLLLLLEEEEHHHLLEEELLEEEELLLLLLLLLLLLLLLLHHHHLLLLLLLLLLL EEEEEELLLLLL |
PRMN | - |
PiMo | - |