NONHSAT016123

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT016123

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1191 nt

Genomic location

chr10+:104209890..104216056

Exon number

2

Exons

104209890..104210117,104215094..104216056

Genome context

Sequence
000001 AGGAAGGAGG GAGGTCCAGG CCCTTCTTCC ATCCCACGTC CTCCACTTCC CAAGGTGCAA GAAGAAAAGA GGTACAGAAC 000080
000081 ACCCAGAGGT GCCCTCGATT CCGTCTTGCA CTTGCCCTTC TCCCACCGTC CAGCAATAAA GCGAGAGAAA CAAGTGCAGG 000160
000161 AAACTGGCCG GCAGTCATGG GAGAAGCCAA AAAGACAGGT GAGCAGCGCG TCCGCCTCCC GCGCACAGga gttcagtggc 000240
000241 atgaccaggg ctcactgcaa ccttgatctg ggctcaagtg atcctcctac ctcagcttcc tgagtagcta ggaccacagg 000320
000321 tgtgcaccaa ccacacccga ctaatttttg tagagatgag atcccactat gttacccagg ctggtcttga actcctgggc 000400
000401 tcaggtgatc atcctgcctt ggcttcccaa agtactggga ttataggctt gagccaccgt gcctggccTG TGATCAGAAT 000480
000481 TCTCATTTTT TTAGTCACTA Aaaatgctgg ggggcactcc attctccatt atgtgattag ttcacattgc atgcttgtat 000560
000561 caaaacatca tatatacccc acaaatatat acaAAAAACT TTAAAATTTT AAGTATTAAT TGCTCAGGAA AAAATTAAAA 000640
000641 TGCTGGGGTG CTGAAATCTC AAGGGCCCCA TTACAAAACT CCTTAGGAAC CTCGCCCTCT CTCTGCTGTA AGGACTGGTT 000720
000721 CCAGAATGAG AGAATTTAAA AGACATTCcc cccccaaaat gttcataatg tcaccccgga aacctgcgaa tatgttatat 000800
000801 tacatgacca gggagaagta aggttgcaga tggcagtaag gttgctaatg ggctgacctt aagataagga gatgatcctg 000880
000881 gattatctgg gtggacccaa tgtaatcaca agggtcctta actgtggaat agtgaggtgg ctgagtcaga ggcagagtga 000960
000961 tgcaatgact gaaagactta accagccatc accggctttg aatacggaag acggtcatga gccagggaat gcaggcaggc 001040
001041 tctgggagct gaaaaaagca agaaaatgga ttctcccctg gagcctccag aagggatgcg gtcctgccaa ccccttgtca 001120
001121 gtgagccatt tcagatttct gacttccagg actgtaagaa aataaacttg tcttgttttc agccaccaag t
[back to top]

Predicted Small Protein

Name NONHSAT016123_smProtein_725:820
Length 32
Molecular weight 3902.7036
Aromaticity 0.129032258065
Instability index 96.9516129032
Isoelectric point 10.6204223633
Runs 5
Runs residual 0.0399865591398
Runs probability 0.0472354707648
Amino acid sequence MREFKRHSPPKMFIMSPRKPANMLYYMTREK
Secondary structure LLLLLLLLLLLLEEELLLLHHHHHHHHHLLL
PRMN -
PiMo -