NONHSAT016363
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT016363 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2015 nt |
Genomic location |
chr10-:112628648..112630662 |
Exon number |
1 |
Exons |
112628648..112630662 |
Genome context |
|
Sequence |
000001 CACACACGCA CACACACACA CACAAACCTT CACTGGCTTC CCATTGCCTC TCTTGAGTGT CAGCGCCTCG GTCGGTCATT 000080
000081 CAAGGCTCCG TGATGTGACT TCAAGACTTT CAGGCTGTGT CTCCACACAT CTCCCCATAT GCTTCCTCAC CCCCTGGTAG 000160 000161 TTCTTTATAT ATCACCTTGA AATGTCTCTC TTCTCATCTC CTATCTCCGC CTGATGCAAT CCTTCTGTGC CTCATGGCCC 000240 000241 TTCCTGGTAG TTTTTTATTT TGTTGTTGTT GTTGTTTTAT TTAATTGAGG CAGGGGCTTG CCCTTTAGCC CAGGAGAATG 000320 000321 CAGTGGCATG ATCACAGCTC ACTGCTGCCT CGACCTCCGT CAGCCTCCCT AGCTCAACGA TCCTCTCACC TCAGCCTCCT 000400 000401 GAGTAACTGG GACTACAGGC ACAGCTCACT ATGCCCAGCT AATTTTTGTA TTTTCTGTAC ACACAGGGTT TCATCATGTT 000480 000481 GTCCAGGCTG GTCTTGAACT CCTGGGCTCA AGCAATCAGC CCACCTCTGC CTCCCAAAGC GTTGAGATTA CAAGCGTGAG 000560 000561 CCACCATTCC TGGACCCTCG TAGTTTTTCT GGAGCCTCGT GATTTGATAT GATCTTCCTG CCGCTGATTC CTCACAGTGT 000640 000641 TGGCTTGCCA CACCTCCAGG GGCACTGATC ACATTCTACC TGGCATTATT TCATCTGAGT CCCTGTCCTA GCCCTTCTGC 000720 000721 CCATTAGACT GTAACCTTGT TTAGGGAAAG ACCTGTGTCT TACTCATCTG TGATTTTGTT GTTGTTGTTG TTTTGAGACA 000800 000801 GGGTCTTGCC CTGTTGCCCA GGCTGGAGAG CAGTGGTGCA ATCTTGGCTC ACTGCAGCCT CAACCTGTTG GGGTCAAGCC 000880 000881 ATCCTCCCAC CTCAGCTTTC CAAGTAGCTG AGACTACAGG CCTGTGCCAC CACACCCAGC TAGTTTTTTG TATTTTTAGT 000960 000961 AGAGATGGGG TTTTGCCATG TTGCCCAGGC TTCTCTTGAA CTCCTGAGCT CAAGGGATCT GCCTGCCTCG GCCTCCCAAA 001040 001041 GTGCTGGGAT TACAGGCGTG AGCCACTGTG CCTGACCCAC TCACCTGTCA TTGTAGTACT TAAGATGCCT TGTTCATTTA 001120 001121 TTGTGCCTGT GCAATAAATA CACCTTGATT TGAGTTTACA AAGATTCTCA GCAGTTGGTG GTCATCCTCA TCTCCTGGGC 001200 001201 GGGGGCCTCC TGGTGTGGCC AGTATCTGAA TTAGTCTCAT AACTCATGTT CACTTTTTAA AATCGGAGCT TCCCAGACCT 001280 001281 CAGTTTTGTT TTGTTATTTT CCATTATCTG CAGCTGTCTC CTTTCCCCTC TCTCACCTAT ACTCTACTGA TCAGTGACTG 001360 001361 CTGGCTCCTT TGTTACCCAT CCTTCTCTTT CTCCACATTT TTTCTCTTCT CATCCCTTTC AGTTCTGGAC TGTTTCCTTC 001440 001441 TTCCTCCCTG TCTTTCATTT AGTCATTCAT TGAATGTACT TACTAAGCAC ATATAGCATA ATCAGGCTGT GTTGGGTAGG 001520 001521 CATCCCGAGT TCTATGAGAT AAAGAAAGAA TGGGATATGA TTACCAATTT TAAGAAGCAT CTAAAACAAC CTGTTATGTT 001600 001601 TTAGCAAATT GCCCCCAAAG GACCCATTAG GGAGGAAAAC GTTCATGTCC TTTTTGCGTA TCATCTCAAG CAGTACCCAT 001680 001681 GATGGCTGGG ATCCCAGAAC CCACCTTTGA GAATGCTGCC GTATTTGCGT GTGGTTGACA AGGTTGGGCC AGACACTCAG 001760 001761 GAAATAGGGT TGTCGTCCTA CCTCCCCCAC TAACTTCCTG TAAGAACTTC AGCCCCTCTC AGGACCTTTT TCTTTACCAA 001840 001841 TAAAATTCAG AAATTGGGCT CAATCAGTAA TTCCCAAGTT ATTTTCCAAA GAACATGAAT TTTGTGGAAC TTTAATAGAT 001920 001921 ATCATGCAAA AAAAAATGTG GGAGGGATTG TTCCATGGTC AAATGGTCTT GGAAATAACT CGTTTAAACA AAAATAAAAC 002000 002001 TGTTTCTTTA CCCAC |
Predicted Small Protein
Name | NONHSAT016363_smProtein_317:496 |
Length | 60 |
Molecular weight | 6699.5156 |
Aromaticity | 0.101694915254 |
Instability index | 63.8796610169 |
Isoelectric point | 8.41363525391 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0386226562698 |
Amino acid sequence | MQWHDHSSLLPRPPSASLAQRSSHLSLLSNWDYRHSSLCPANFCIFCTHRVSSCCPGWS |
Secondary structure | LLLLLLLLLLLLLLLHHHHHLLLLLLLLLLLLLLLLLLLLLLEEEEEELEELLLLLLLL |
PRMN | - |
PiMo | - |