NONHSAT016696
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT016696 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
588 nt |
Genomic location |
chr10-:122892604..122893237 |
Exon number |
2 |
Exons |
122892604..122892868,122892915..122893237 |
Genome context |
|
Sequence |
000001 ATGAGTATGC TCAGTCTTCA GAAGAGGCTT GCCTCTAGTG TCCTCCGCTG TGGCAAGAAG AAGGTCTGGT TGGACCCCAA 000080
000081 GGAGACCAGT GAAATCGCCA ATGCCAACTC CCATCAGTGG ATCCGAAAGC TGATCAAAGA TGGGCTGATC ATCCACAAGC 000160 000161 CTGTGACTGT CCATTCCTGG CTTGATACCG GAAAACACCT TGGCCTGCCA GAAGGGCAGG CACATGGGCG TAGTTAAGTG 000240 000241 AAAGGCTACA GCCAATGCCC GAATGCCAGA GAAGATCATG TGGATGAGGG GATGAGGATT CTATGCCAGC TTCTCAGAAG 000320 000321 ATACATGAAT CTAAGAAGGT TGATCGCCAC ATGTATCACA GCCTGTACCT GAAGGTGAAG GGGAATGTGT TCAAAAACAA 000400 000401 GCGGATCCTC ATGGAACACA TCCACAACCT GAAGGCAGAC AAGGCCTGCA AGAAGCTCCT GGCTGACCAG GCTGAGACCC 000480 000481 GCAGGTCTAA GACCAAGGAA GCACGCAAGC ACCGTGAAGA GCACCTCCAG GCCAAGAAGG AGGAGATCAT CAAGACTTTG 000560 000561 GTCTAAGGAG GAAGAGACCA AGAAATAA |
Predicted Small Protein
Name | NONHSAT016696_smProtein_302:565 |
Length | 88 |
Molecular weight | 10340.0599 |
Aromaticity | 0.0344827586207 |
Instability index | 59.2666666667 |
Isoelectric point | 10.0474243164 |
Runs | 12 |
Runs residual | 0.000328407224959 |
Runs probability | 0.0384943767297 |
Amino acid sequence | MPASQKIHESKKVDRHMYHSLYLKVKGNVFKNKRILMEHIHNLKADKACKKLLADQAETR RSKTKEARKHREEHLQAKKEEIIKTLV |
Secondary structure | LLHHHHHHHHHLLLHHHHHEEEEEELLLHHHLHHHHHHHHHHHLHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |