NONHSAT016724
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT016724 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2399 nt |
Genomic location |
chr10-:123716656..123734731 |
Exon number |
11 |
Exons |
123716656..123716774,123718839..123718925,123719016..123719110,123719873..123719921,123720938..123721032,123721356..123721622,123722753..123722843,123724801..123724900,123727170..123727321,123730454..123730584,123733519..123734731 |
Genome context |
|
Sequence |
000001 GTTTCTGGCG CGAACTTCCG CCGTTCCGAA GTTGCACGGT GAATTGGCGC TATGTCTGGG GACAGCAgcg gccgcgggcc 000080
000081 agagggccgg ggccggggcc gcgACCCGCA TCGGGATCGC ACCCGCTCCC GCTCCCGCTC GCGGTCCCCT TTGTCGCCCA 000160 000161 GGTCCCGCCG CGGCTCTGCG CGGGAGCGCA GAGAGGCCCC AGAGCGCCCG AGCCTGGAGG ACACAGAGCC GTCGGATTCC 000240 000241 GGGGACGAGA TGATGGACCC GGCCAGCTTG GAGGCGGAGG CCGACCAAGG CCTGTGCCGC CAGATCCGCC ATCAGTACCG 000320 000321 GGCGCTCATC AACTCCGTCC AACGTAAggc ggcgcctccg ggcggcgcgg gcccggacgg gccgctgtcc ccgccctgcg 000400 000401 ccgggcgcgg ggggAGGGCA CCGGAGGCAG GTGCCGGGCG GAGGCCCGGC GCGGCGTTAG TAGAGACGCG CCGGGTGCCA 000480 000481 GCCCCTCGCC GCACCTTAAA TTGTTGACAA AGTGCTCCCA CTTTGTGGCT GGAGCCGTAC GACCTTGGCG CGGGTCCCCG 000560 000561 AGTGGCGGGC TGGAAAAGCT GGAGGCCAGA GCCGTTCGCG GACTCGCCCG AGCCCAGCCA GCCAGTGGGG AGAGGCAGGA 000640 000641 CGCGGACTCC GCGTGCTTTG ATTGCGCCCG GCAGTCCTCG GCGTGGGCTC CCGGCCTCGC AGCGGCAGCT gcagctgcag 000720 000721 cggcacgcga gagctgtcaa atgcacgttc tcggacccca cccggacccg cggaattcga atctctgggt gggtccgcgc 000800 000801 aactgtggag tggccctcca ggtgatggtg tgtattgctt gcaaagtttg agaaccactC AGTTATGGAG CACTCAGAGG 000880 000881 CTGCAGCCGG AGTCCAGCCC TTTGGGTTAA GGTTAGAGGG AGCTAGGGTT TCCTTTTAAA ATTCATGCTG CATAAAGGGT 000960 000961 AGGGTGGCCT TTCTCCTTTT CCGGGTCATT TTGGTTAAAA AGATAAAGAT GTTCGAAGTA ATTACTCAGA GCGCAGGGGC 001040 001041 CGGGGCTTGG CTTTACTGTT GCAGGTGATA ACCTTGTCAA CTGCTTATTA GTGAATGCTG AACAAATTTC CCAAAGTTTG 001120 001121 TATTTTTAAA AATAGAAAAC CGTGAGGACA TACTGAATGC CGGTGACAAA TTAACAGAGG TCCTTGAAGA GGCTAACACT 001200 001201 CTGTTTAATG AAGTGTCCCG AGCAAGAGAA GCAGTCCTGG ATGCCCACTT TCTTGTTTTG GCTTCAGATT TGGGCAAAGA 001280 001281 GAAAGCAAAG CAGCTGCGCT CAGACCTGAG CTCCTTTGAC ATGTTAAGAT ATGTTGAAAC TCTACTCACA CATATGGGTG 001360 001361 TAAATCCGCT AGAAGCTGAA GAACTCATCC GTGATGAAGA TAGTCCTGAT TTTGAATTCA TAGTCTATGA CTCCTGGAAG 001440 001441 ATAACAGGCA GAACAGCAGA AAACACCTTT AATAAAACCC ATACATTCCA CTTTCTGTTG GGTTCAATAT ACGGAGAGTG 001520 001521 CCCTGTGCCA AAGCCACGAG TTGATCGTCC AAGAAAAGTT CCTGTGATAC AAGAGGAGAG GGCAATGCCT GCCCAGTTAA 001600 001601 GAAGAATGGA AGAATCTCAT CAAGAAGCAA CAGAGAAAGA AGTAGAAAGA ATCTTGGGAT TGTTGCAGAC ATATTTTCGA 001680 001681 GAAGATCgag acagtctcac tctttcgccc agactggaat gcagtggcac catctcaact cactgcaacc tccacctcct 001760 001761 ggattcaagc aattctcctg cctcagcctc ctgagtagct gggattacag gcgcacgcgc caccacatct ggctaatttt 001840 001841 ttttctgtat ttttagtaga gacattgttt cgccatgttg gccaagctag tcttgaaccc ctgacctcag gtgatctgcc 001920 001921 agcatcggcc tcccaaagtg ctgggattac aggtCTGATA CCCCAATGTC CTTCTTTGAC TTTGTGGTTG ATCCTCATTC 002000 002001 TTTCCCCCGT ACAGTGGAAA ACATCTTTCA TGTTTCCTTC ATTATACGGG ATGGTTTTGC AAGAATAAGA CTTGACCAAG 002080 002081 ACCGACTGCC AGTAATAGAG CCTGTTAGTA TTAATGAAGA AAATGAGGGA TTTGAACATA ACACACAAGT TAGAAATCAA 002160 002161 GGAATTATAG CTTTGAGTTA CCGTGACTGG GAGGAGATTG TGAAGACCTT TGAGATTTCA GAGCCTGTGA TTACTCCAAG 002240 002241 TCAGAGGCAG CAGAAGCCAA GTGCTTGATG CTAGCTGAAG GACTCAAATG GATAGTGAAG TCCAAAACGG AAAGCGGCAT 002320 002321 GTATCGTACA TATTGTATGA TTCAACATTT TTAAAGGCAG ATTGTTTTTA GTAAAATGTA GCTTTTGATA GTTAATAAA |
Predicted Small Protein
Name | NONHSAT016724_smProtein_1718:1855 |
Length | 46 |
Molecular weight | 5632.4844 |
Aromaticity | 0.222222222222 |
Instability index | 79.5288888889 |
Isoelectric point | 9.77935791016 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.0211314255432 |
Amino acid sequence | MQWHHLNSLQPPPPGFKQFSCLSLLSSWDYRRTRHHIWLIFFLYF |
Secondary structure | LLLHHHHLLLLLLLLLLLEEHHHHLLLHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |