NONHSAT017204

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT017204

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3417 nt

Genomic location

chr11+:210364..213780

Exon number

1

Exons

210364..213780

Genome context

Sequence
000001 TGGAGTTTTT AGGAAGACAG CAGTGGTCAT CTTTTGCCCC CAGCACTACC CAGAGTCACC TAGGAAGACC CCAGGGGACC 000080
000081 AGGTATGCAG TACAGGAGGT GCACAGTCAT TGCCACACAG TCCTGGAGTG CAACAGACAG TGGAGCCTCA GCAGGCAGCA 000160
000161 GTGGGATGAG TGGGGCTCCT CACAGGAACC CTTCTTTCTT TGGTCAGGAA GACGCTGCCC TTTACCGACA CCTGGGGACC 000240
000241 CTTCTCCGGC ACTGTGTGAT GATCGCTACT GCTGGAGACC GCACAGAGGA GTTCCACGGG TGAGAATGGG GCTTTTTCTG 000320
000321 GGAGGGAAGT GTGCCCACAT GTCTAGATGG TCGTCCTCAA CCCCGGCTCT GAACCAGAAC CACCTGAGAG CCCAGGCCCC 000400
000401 ACCCTAGAGA GTCTGACGTT GTCTGGGTGA GTGAGACTGG ACATAGCCAT GAATTTGGGG GCAGGAATGT GCCAACTGGG 000480
000481 CCTTGGGTAG TGGCAACAGT ATGGTACTTA CTAGGGCACA TTGGTTCCTT GTCCCCGTTT TTGGTCTACC TGCCCCTAGG 000560
000561 CTGGTCTGGG TTTCCAGAGA TGGTCTGGCG CTTTGGCTCA GACAGGGTCG GGGAGGCAGT GTGTCTCAGT GCCCCCACTT 000640
000641 CCCCAGGGGA CCCCACTGTA CAGCTGAGTG GCAGTGCCTC TCAGATCAGT CCCTGCCCTT GGCTTTGGTC CCTAGCGCTG 000720
000721 CCCCTTTGGG ACTCAGATGC CAGCTCATGT AATGTGTGGT TCAGCGGAGT CACAAAGATT GCACCTGTGC TCAGGGATTA 000800
000801 GCCCTGTTGA AACCCCTACC TCCATCTGTC CCCAGCCACG CAGTGAACCT CCTGGGGAAC TTGCCCCTCA AGTGTCTGGA 000880
000881 TGTTCTCCTC ACCCTGGAGC CACATGGAGA CTCCACGGAG TTCATGGGAG TGAATATGGA TGTGATTCGT GCCCTCCTCA 000960
000961 TCTTCCTAGA GAAGCGTTTG CACAAGGTAG GCTGGGGATG GCTGTGCAGG CTCCCCCAGT GGCTCTGGCA CTGGTTCTCC 001040
001041 TGCACAGATG TGGTCAGTGC TTCCACACTG TCCACACTGG TACGTGGAGA TTGTCTTGGT GGTGTGATAT GGGCGACTCT 001120
001121 TCCGGTTGTT CTGTGGTCCA GCCTGGCAAG AAGCCAGACC CTTCCTCCAT GAGAAGCATG TGGACACCTT CCACACACTT 001200
001201 GAAGGTTTCA CTTCTTAAAT CTTTGGGGAT CTTTACTGAG TGGTCCAGAG AAGCCCCCCA GTCCCTACTT TTAAGTCTTA 001280
001281 AACACAGGCA GCCCTTGATT ACAAGCATAG TTGTCCCTCA GCATCCTGAG GAGACCCATA GGAACCTCAG ATCAAAGCTT 001360
001361 CCTTCTGATT GCTGTGACTG CACTACAGGG CATCTGGACA GCTGGGGCTC TAACCATCTT CCAGGAGCTT GCAGAAAGCA 001440
001441 GGCTGGAGTA CAATAAACCG AGATTTAGTA GACCTCCTGG GAATCTACCT GCCTAAGCAA GGGACACACA AGGTGCCTGC 001520
001521 GAGCCAGTCA GGATAGGGAG CTGGCACTGG ACACACAGCT AGGGGGTTGT CTGTGCCCGT CGCTGCCACT GCTGGTGCTG 001600
001601 GGGTCCAGGC ACATTATGCT AGGAGGGTCA AGAACTCCCT GCTCTGTCCA CGAAGTACAC AGAGCGGGGA TTCGGTTCTC 001680
001681 GTTTCTTTTT GCCACCAACA TCTGAGGGCA ATGTGTGTGC GAGTCTAAAG CTTTAATTGC TTTGTGTTTT CTTCCCAGCT 001760
001761 CTGGTTTATA GTTGAAGTAA TTAGACTTAA AGCAGTTATT TCTCCCAAGT CACAAAGCTT ACGAGTACCT CTGAGTTACG 001840
001841 CTCTATCCCT GTCCTTTTCA AAAGTGACAC AGACACCCAC CACCCACTCT TGGCCTTCTG CTGACTAACT GCAGAGGGGC 001920
001921 CTCTTCCCAA ACCTCTGCCG CCAGGACCAG CTGTTGTGTA TGTTGGTGGG AAGGGGTGGT GGGGAGGTGT AACTCTGTGC 002000
002001 CAGTCACAAG TTAGGCAGGG GCATAGCCCC AGTGACAGAG AATCCTCTAC AGACACACAG GCTGAAGGAG AGTGTAGCTC 002080
002081 CCGTGCTGAG CGTGCTGACT GAATGTGCCC GGATGCACCG CCCAGCCAGG AAGTTCCTGA AGGCCCAGGT ATAAGGCTGA 002160
002161 GGAGCTGGTG CTCCTGGGGG ATGTGGTTTC GGCCCTGATC ACAGACCCTT GGCTGCTCTA AGCCCAAGCT TAGGGATGGC 002240
002241 CACCTCCCCA GGTGCTGCCC CCTCTGCGGG ATGTGAGGAC ACGGCCTGAG GTTGGGGAGA TGCTGCGGAA CAAGCTTGTC 002320
002321 CGCCTCATGA CACACCTGGA CACAGATGTG AAGAGGGTGG CTGCCGAGTT CTTGTTTGTC CTGTGCTCTG AGAGTGGTGA 002400
002401 GTTATGGAGA CCCAGGTCCC AGCCCACCCC ACCTCAGCCA GGCTTGCACA CTGACCTCTG CCTTGCCCCT CAGTGCCCCG 002480
002481 ATTCATCAAG TACACAGGCT ATGGGAATGC TGCTGGCCTT CTGGCTGCCA GGGGCCTCAT GGCAGGAGGC CGGCCCGAGG 002560
002561 GCCAGTACTC AGAGGATGAG GACACAGACA CAGATGAGTA CAAGGAAGCC AAAGCCAGGT GTGTACCCCC AACACACCCT 002640
002641 CGGGTCTCCA CTCACAGCCC CATAGTCCCT GCTTCCACAC CCATGTGGAC CCCTGTAGGG TGGGACAGGA TGACAAATGG 002720
002721 GCAAGAGCTT CCAGAATCAA GCACCTGTTC CTAAGTGCTA TCTGGGATAC CAGAAGGTGG CAGATGGCAG GAGCTGGTTA 002800
002801 CCTGTGCCGC TTCTGGAGGG AGGCCTCTTC CTGCAGTTGC CTTGCCCACC TCACCCCACT GGGAAAATAG GTGGCTTGCC 002880
002881 TCCTGTCCTG GAGAGTCACT AATGCATTCC CCACATTCCA CCCACTGGGA AACAGCATAA ACCCTGTGAC CGGGAGGGTG 002960
002961 GAGGAGAAGC CGCCTAACCC TATGGAGGGC ATGACAGAGG AGCAGAAGGA GCACGAGGCC ATGAAGCTGG TGACCATGTT 003040
003041 TGACAAGCTC TCCAGGTGTG TGGCATGAGG AGGAGGGGCC TGCAGCTGGG AGAAGGGAGA GCTGACCCAC ATCCTGTCTT 003120
003121 GTGAGCCCCA GGAGGTAGGA TCAGAGGAGA GCTTAGGATC CTGGTATTAG GTTGCATTGC TCACGTTTGA AATCACTTGC 003200
003201 CCTGGAGGAA ATCCCCCAGG GGATGGGTAT ATTGAGATCA Gtattgtgcc ccttttacag atgataactg aggcccagag 003280
003281 aaattaagag actgtctaag gccgggcgtg gtagctcacg cctataatcc cagcactttg ggagactgag gcaggtagat 003360
003361 cacaaggtca ggagatcgag accatcctgg ccaacatggt gaaaccccat ctctgct
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Predicted Small Protein

Name NONHSAT017204_smProtein_500:751
Length 84
Molecular weight 9157.7287
Aromaticity 0.0843373493976
Instability index 52.334939759
Isoelectric point 9.46783447266
Runs 13
Runs residual 0.0165997322624
Runs probability 0.0468794586442
Amino acid sequence MVLTRAHWFLVPVFGLPAPRLVWVSRDGLALWLRQGRGGSVSQCPHFPRGPHCTAEWQCL
SDQSLPLALVPSAAPLGLRCQLM
Secondary structure LEELLLLEEEELLLLLLLLLEEEEELHHHHHHHHHLLLLLLLLLLLLLLLLLLLLEEEEE
LLLLLLLLLLLLLLLLLLEEELL
PRMN -
PiMo -