NONHSAT017227
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017227 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(AS) |
Length |
1207 nt |
Genomic location |
chr11+:318653..325631 |
Exon number |
2 |
Exons |
318653..318746,324575..325631 |
Genome context |
|
Sequence |
000001 CTTCGGAGTT CGCCCCCTTC GGGACTCGCC TCCGGGAGAC CCCCGAGGGG GAGAGGGCGC TTCCTCCGCG TCCATCGCCC 000080
000081 TTGCCGCCCC TGGGAGAGCT CTTGTCAGAG CTATTAGCTC TGCTTTCTAA GCAGAAGTTT CTGCAGACAG AGACGGTACC 000160 000161 TCTACTGCTG AGTCCAAAGT CACCGCGGCA TACCCAGCTC GGCAGACTCC CCTTAGTACG AAACTGCTTC CATCAGTAAA 000240 000241 ATATTCAATG TCCAGGTCCC CGAGGGGCCA ATCTGTTAAA TCTTTCCAGC TTGAGAACAC TTTATCTACC ACGTCCACAC 000320 000321 AGCAATGAAG GGGACTTCCT GTGTAGGGTC CAGCCCTACG GGGGCTTAGC GGGTGTTCTC CCCGTGTGCA GAGACAAGAG 000400 000401 ATCGTAAGAA ATAAAGACAC AAGACAAACA GATAAAGAGA AAACAGCTGG GCCCAGGGGA CCACTACCAC CAAGACATGG 000480 000481 AGACCGCTAG TGGCTCCGAA CGGCTGGCTG CGCTGATATT TATTGAATAC AAGACAAGGG GGCAGGGTAC GGACGGTGAG 000560 000561 TCGTCCAAGT AATTGATAAG GTGAAGCAAG TCACGTGATC ATAGGACAGG GGGCCTTTCC CTCTTAGGTA GCCGAGCAGA 000640 000641 GAGAGAAGGC AGCATACGTC AGCGTTTTCT TCTATGCACT TATAAGAACA ATCAAAGACT TTAAGACTTT CACTATTTCT 000720 000721 TCTACCGCTA TCTACTACGA ACTTCAAAGA GGAACCAGGA GTACGGGAAG AGCATGAAAG TGGACAAGGA GTGTGATCAT 000800 000801 TCAAGCACCA CAGGGAGGGG GTTAGGCCTC CGGATGACTG CAGGCCAGGC CTGGAGAATA TCCAGCCTCC CACAAGAAGC 000880 000881 TGGCGGAGCA GAGTGTTCCC TGACTGCTCC AAGGAAAGGA GACTCCCTTT CACGGTCGGC TAAGTAACGG GTGCCTTCCC 000960 000961 AGGCACTGGC GTTACCGCTT GACCAAGGAG CCCTCAAGCG GCCCTTATGT TGGCGTGACA GAGGGCTCAC CTCTTGCCTT 001040 001041 CTAGGTCACT TCTCACAACG TCCCTTCAGC ACCTGACCCT ATACCCGCCG GTTATTCCCA GGTTATATAG TAATGGAACA 001120 001121 AAGAGTAATA TTAAAAGCTA ATGATTAATA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 001200 001201 AAAAAAA |
Predicted Small Protein
Name | NONHSAT017227_smProtein_773:946 |
Length | 58 |
Molecular weight | 5991.6901 |
Aromaticity | 0.0175438596491 |
Instability index | 55.5035087719 |
Isoelectric point | 9.29913330078 |
Runs | 8 |
Runs residual | 0.0135964912281 |
Runs probability | 0.0442501324855 |
Amino acid sequence | MKVDKECDHSSTTGRGLGLRMTAGQAWRISSLPQEAGGAECSLTAPRKGDSLSRSAK |
Secondary structure | LLLLLLLLLLLLLLLLHHHEELLLLEEEEELLLLLLLLEEEEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |