NONHSAT017266
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017266 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1506 nt |
Genomic location |
chr11+:524147..529495 |
Exon number |
2 |
Exons |
524147..524315,528159..529495 |
Genome context |
|
Sequence |
000001 cacgtggaaa aatgaaagaa gactcacata acccaacgtt acactgactg tggagtgaca gcgtgaggcc agcttggtgt 000080
000081 tggagaaggg gcagacacac accgagggaa gacgatggag atcccagaaa cggacgcaca caaatatggc tcatggatta 000160 000161 ttgaccaagG CCTCCCTGGA TGGATGTTGG GAGAGTTTAC GCGTGGCCTT GTGGGATCGC TGTGGCGGAC TCTCAGCTAT 000240 000241 CAGAGGGCTC CATCACTCCA TCGTAAGGAG GCAGCTGGTG GCGAGTCCTG AGCAGGGATG TGATCCGACG GGCAGGCGGC 000320 000321 GCCCGGGACA GAAGCTGACG TCACACAGGT GAGTCCCCCA CCTCCCCACA GGCTTCCTCC ACCCCCTCGG CAGCCCAGCA 000400 000401 GGGCCTGTCA ATCAGTGGGA CCTGGTCAGC TGGCTGCTAG GGGACCTCAG GCAGGGGGGC TTGTCCGCAG GGCCTCCAGC 000480 000481 AAGGGGGGAC ATTCATGACA CCCAGCAGGG CTCAAGAAGG TGAGACAGAG GGACACTGAA CCCAGCCCTT TACAGAAGAC 000560 000561 CTGAGTCCAC CGAGGAAGGG GGCCAACCCC CTCCCCGCGT CTGCATCCCC AGGACCACCC CGGGTGGAGA GGGCCGAGTG 000640 000641 TGGTGCCTCC GCGGGTGCTC TGACGATCGT CTCGAGCCAC GGGGGTGACA GTGACAAGGA CCTGTGTGCA CGTTAGTGGG 000720 000721 GCAGCCAGGC CTAGCTGGAG AAGAAacaca cacacgcaca cgttcaccca catacacgtg cacacacaTG CTGCCAGTTC 000800 000801 AGGGGGTGGA GGACGCTGAC TCCAGGCCCA GCTGACCTGC GCGGGGCCCT ATTGTGATGT GTGCAGCCAC CCCATGACGT 000880 000881 CACCGGTGCC AAGTGCCGGC TGTGTGCGGA GCAGTTGGAG ACACAGTGGG TGTCCGAGGG GGGGCTCTGC GTCCGGAGGT 000960 000961 GAGAGGTGGG TCTCAACACA GCTGCCCTCC CCCATGGTAT GGTGACAGTC ACTAACAGGT GGCCTGCGCT GGCCTCCACG 001040 001041 TGGCTGCCAA GGGCCATCCC tgagcactca gcgggtgcct gttccacacg gactatgaaa atgactgtct cgttcacctc 001120 001121 acggcgaccc cgtggggtgg atacgaactc acgccatttg acaggcgaga cgtccgaggt cagaggggag gagacggacc 001200 001201 cgaCCTTCCT TGGCTGTGCT CTCCAGCCCT GTCCTGTGCT GGACCCAACC TAACCTCTGC AGCCTCCCTG CCCTGGACAC 001280 001281 AAATCTGGCT GAGACCCCAG ACCCTGATGG GGCAGAGCCT GGCACTGGAG GAGCCACCAG GATGGGCCCC TGTGGGTGTG 001360 001361 GGCAGAGGGT GATCCTCAGT TCAGGTTTTT GCCAGAAGAT GGGTTCCTGC AGGAGGGGGT CTCAGCAGCT CAGACTTCAG 001440 001441 ATGCGCTCAC TGCTGCTCAC TGTGGGACAG CCAGACACGG AGCCCTCTGT TCTCCAGCAG TTGTGG |
Predicted Small Protein
Name | NONHSAT017266_smProtein_998:1252 |
Length | 85 |
Molecular weight | 9186.329 |
Aromaticity | 0.047619047619 |
Instability index | 47.2464285714 |
Isoelectric point | 7.77935791016 |
Runs | 11 |
Runs residual | 0.0030330603579 |
Runs probability | 0.0315235021117 |
Amino acid sequence | MVTVTNRWPALASTWLPRAIPEHSAGACSTRTMKMTVSFTSRRPRGVDTNSRHLTGETSE VRGEETDPTFLGCALQPCPVLDPT |
Secondary structure | LEEEELLLHHHHLLLLLLLLLLLLLLLLLLEEEEEEEEEELLLLLLLLLLLLLLLLLLEE EELLLLLLLEEELLLLLLLLLLLL |
PRMN | - |
PiMo | - |