NONHSAT017278

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT017278

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2923 nt

Genomic location

chr11-:565535..568457

Exon number

1

Exons

565535..568457

Genome context

Sequence
000001 cgcggggccc ggggccggtc gggtcgggcc ggggggcgAG AGGGTGCCAG CGGCCGCAGC TGAAGTTGGG CCGAGAGCCG 000080
000081 GCGACGGCCC CGCGCCGGGG TCGCAGGTGA CGCGCGAGGG ATCCCAGGTT GGCGGGCGGG GCGCCCCTCA GAGGCCGCCC 000160
000161 TCCCGCGGGG GCTGCGGGGG GTCGGGCTGG GCAGGCGCGG CGGGGCTCGG ACGCCCAAGT TGGAGGGGAC GGGGGTGGGG 000240
000241 TCAATCCCTC CGCCCGCCCA CCCGGCAGTG CCTCCAGGCG CAGGGCAGCC CCTGCCCACC GCACACTGCG CTGCCCCAGA 000320
000321 CCCACTGTGC GTGTGACAGC GGCTGATCTG TGCCTGGGCA GCGCGACCCT CCTGGCCCCG TGTCCGGGTC TGGCGGGCAG 000400
000401 GCGAGCGGCC ACACGGGGAC GCGAGGGCAG CTGGATACCG TGGGGAGGGG GTGCCCTATG GACGGGGTGT GCCTGTCTGG 000480
000481 CCAGCAGGGA CGGCGGGTGG GGGTAAGCGA AATCATTCGG GGGCTTTGCT GCCCTCCGCT TGGTGGGGCT GAGGCTGGGC 000560
000561 CAGATACCCT CTTGGAGGGA ACTTTCTTTT CCTTGTGTGT CCAGGGTACC AGTGTGCGGA GTTCCTGTTG CCAAGCTGAA 000640
000641 GGTGGCCCTG GGCAGGCACA GGTGTGGTCA TATCTTCAGC CAACAGGACC ATCCTCCGGA GGGCCACCTC TGGGGACTTC 000720
000721 CTACGGGAAG AGAGTGACAG ATTTGGTGCT TCTGTGTGTT TCTGCCGCTT CAGTGGGGCC GCTGCGGGAG ACAGCGGGTG 000800
000801 GATCCTCCAG CAGCCTGTCT GCTGAGCCTG CCTTCTCAAG TCTACTGTTA AAATCAGGAC CGGGTCGTGT CCGAGCCTAC 000880
000881 AGGCCCTGTC TCCGCTCCCC AGGCCTGCAG GAGTTGAGGG CTGCACCTGC TCGCTGGAGA GGGAGAGGCA GATTTAGTGG 000960
000961 ACGCCTGGCA TGGACTCGGA CTGGCCTTTG GAAGCTCCCT GCCCTGACGG GGTTGCCTGT CACCACTGCG AAGTGAGGCT 001040
001041 TGGCAGGACC TGCACCTGAG AAAGGCTGTG TGTGGTCTTG GGGTCCACAC CTGCAGAGCT AACTTACTGC CAGACGGCGA 001120
001121 CTTACTGTGG GCCACCCTCA GTGAACCGGG GTGTCCTCAG CTGGCCCTAC AGAGCACTTC TGTGCTGGGG ATGAGTAGGA 001200
001201 ACTCTGGGCG AGGAGGGTCC CAGCGCCGCC CCTCGATACA GCCTGGCTCT GCCCTCTGCC CGTACTTACA CCAGGTGGGA 001280
001281 TCCCTGCCCT GCATTGCCTG GGGATTGGCT GGGCTTGGGC CCGCCCTGCT GTGGAACTGG ATGTTTTCAG GGAGCCCAGC 001360
001361 CTTTCCTCAT GTCAACACAG TTCACAATAT AGTTTTCAAA GTACAGTTTA AAACTCAAAA GTAAACTTTT CAGCAACTCA 001440
001441 AAGGTTTGCT GAGTGATCTG AAGCACTCTG GCCACTTTTT GGGGCCATGG GATTTGGTTC ACCTGAAACA GCCAGTGAGA 001520
001521 ggccgggtgt ggtggctcac acccgtaatc ccaacacttc aggaggcaga cgcgggtgat cgctcacttg agatcaggag 001600
001601 ttcaagacca gcctgggcaa catggtgaaa cctcgtctct actaaaaata caaaaattag ctaggcatgg tggtgggcac 001680
001681 ctgtaatccc agctacttgg aaggctgagg caagagaatc gcttgaacct gggaggtgga ggttgcagcg agacgagatt 001760
001761 acgccgctgc actccagcct gggtgacgag agactctgcc tcaaaaaaat aaaaaaatga aaCAGCCAGT GAGGAGGAAG 001840
001841 GCTCCCCGCC TTCCCCCCGC CGGAACATAG CCATAGCTGC TGCTGGGACA CCCTCTTGGT GGGGAAGAAG GCTGGTTAGC 001920
001921 TTCATCAGAG CCAGCAGCAG CAGACCAGGG ACGGGCACCT AGGCAGTGGC CTCAGAGTGA ACAGGAGTTC CTCAGAAACA 002000
002001 CACACAGGGA CGGCGTGGCG CATGCTCTGC CAGCTCCATG CCTCCTTCCC ATTGTGGGGC TGGGGTACGT AGGGCAGAGC 002080
002081 TCATGACCTC CGGGAGGACA TGGGGGTGGG CTCTGGATGG CACCTGGCAT TGCCCCCTGC TGGCCTATGT GACGGTGTGG 002160
002161 AGGGCTGGTC ACAGAGGTAC GACCATCCCT CCAGAATGTG GGTCGGGGCT GTGGATGGAG GAGTAGGCCC CTCATATCCC 002240
002241 AGGCCTGCTG CCCAGGCACA ACCCACTTGG CCTATGCATT CCAGGCTCCA TCCCATGTGA CTCTGGGCTT AGCCCCTTCT 002320
002321 GGGGCCACAG GTCAGGCAGG TCCAGGCCCC AAGGACCTCC CAGTGACAGG CGACTGTGAG CTGGGCAGAC AGGAGTGAAG 002400
002401 TCAGGTGGGG GTTCTGGCTT GCTGACACCA GCGTTTGGAG CCTCCTGCTG CTGCCTGGCT TCCCTGCATT CCCTGTTCCC 002480
002481 TGCCTCAGGC AAGAAATAAC CAAGCCGAGT TGCCTCTGCA CAGCAGTGAG CTCCTGGTGG CCCTGGCTTC TGGGGAGCCC 002560
002561 TGTGGATGGC TTCCTTGCCC AAGTCCAGGC CTTCTTGTTC CCTTTGTGTG CTCCAGAGAA AGGGGGCAGC ACCAGATCCA 002640
002641 GATCCAGGGC CAACCAACAG AAAGCTGAGT CCATCCCAAA CTCGCCCATT CTCAGAGCAC AAAGACCCCA TGATCTAGGG 002720
002721 caaacttgtc caactgttgg cccatggaac agctttgaat gcagcccaac acaaatctat aaattttctt aaacattgtg 002800
002801 agttgttttt tgttgttatt ttgagacaga gtctcgatct gtcgcccagg ctggagttag tggcccaatc tcggctcact 002880
002881 gcaagctccg cctcctgggt tcacgctcgt ctcctgcctc agc
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Predicted Small Protein

Name NONHSAT017278_smProtein_1190:1423
Length 78
Molecular weight 8389.64
Aromaticity 0.103896103896
Instability index 57.4480519481
Isoelectric point 11.0127563477
Runs 11
Runs residual 0.00677583286279
Runs probability 0.0619630325512
Amino acid sequence MSRNSGRGGSQRRPSIQPGSALCPYLHQVGSLPCIAWGLAGLGPALLWNWMFSGSPAFPH
VNTVHNIVFKVQFKTQK
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLHHHHHLLLHHHHHHHHHLLLHHHHHHHHHLLLLLLLL
LLEEELEEEEEEEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHH
HHHHHHHHHHHHLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTT
TTTTTTTTTTTTiiiii