NONHSAT017414
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017414 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1429 nt |
Genomic location |
chr11+:1686827..1689086 |
Exon number |
3 |
Exons |
1686827..1686994,1687665..1687773,1687932..1689086 |
Genome context |
|
Sequence |
000001 GAGGAGGGTG GCCTGTCCCG GGCAGACCAG CCTCTTTGGG CTGTGTGGCC CCAGCTCCCT GAGCCCAGAG GGAGGTGAGG 000080
000081 GTGAGAAGGC CTGGACCAGG CAGGACGCAG CCCCCAGGGC CCCTGCTGGG AAGAGGTCAG AACCTCCCAA GGACCCAGAA 000160 000161 GGCCAGAACA CACTAGAGGG TCCCGGCATC CTGATGAGTC CACTGTCCCC GCGATGGTTT TCAGGGATGG AGAAGGCTCC 000240 000241 CTGTCCTCCG CTGGAACCCT GCAGCCGGGC TGACGAGACC CCAGCGAGAC CTGCAGAACA TTACAGCAGA ATGAAGGAGA 000320 000321 GCCAGAGGAA GAGGCAGATG TGCTGGCCTG TAAACAGTCT GATTTCCAAT GTAAACCAGA TTCAGGCCCA CGACATCAGG 000400 000401 TAAACATCTG CATCAGAGCC CCCGGCCCCC CACCGCCCGG GAGGCCCCGG GGTCCACACG GCCGACTCTG GGACCCGTCA 000480 000481 CAGTGACCGC CGAGACATTT CGTAATTAGG CAAAATTGAT CCTTGCATTC CTTCCCTAAA TCCCAAATCT CTGCAATTTT 000560 000561 ACTTCTTCTC AAAAATGAAA ACATTTGGCA ATTAGCTGAT CCAAGTGAAA AAGGTAGAGA ATGTGCTCTC AACTGGAAAA 000640 000641 TGCCAATTAA GGAAGCAGCT CTGACTTCCC ACCCGCCCTG GCTAAGCTGG GAGCTTATCT TCCCCGAGAA GAATCTGCTG 000720 000721 GGATAAGGGG GCTTGGGAAA CACCGAGGGC AGGGCTGCCT CCTCAGCTTC CTCTGAGAGC AGATTAGCCG TGGCCTTGTG 000800 000801 CCAGCAGGGC CTGGGTGCCA CACAGGGTGG CAGGGGTGGC AGAGCCGGGC CCGGCTCTGG TACTGGGATT TGGGGTGGCG 000880 000881 GGACCCAGTG GGGCACCCGC TTGTGGGCGG CACTGAGGGC GGTGACGTAG GCAGCGGGTG CCGGTGTCTG CCCCTCCATC 000960 000961 TGGCCGGGCT CCCCACCCTG CTCCTGCAGC CCTGGACCTC AGGGCCCATT TGCGGTGCAA GGCGGCTCTT GGCCATTTTG 001040 001041 CCCGCAGGGC CCTACCTTGG GTCTTGGGAG CTTCTGTCCC TTGCCCTCTC TTGTCCAGGT CAGCATCTCC CACTGTGGGA 001120 001121 ATCCTATGTG GCCCCATCGT CTGGACAGTG TGGGTCAGGT CACTGTGGCT GTTTTGTGAT GCGTGTGTGG GCTCATCCCT 001200 001201 CAGTGCTCAG AAGCTGCAGA CACTATGGAA CCGCTTTTCA GGCCCCGTGG CCGTCACCCC CGCTCTAGAG ACTTGATTGC 001280 001281 AGGGACCATG CCCGGCCGGC CTAACTGCAC CCCTCACTCC AGGTGGGTGG GGGGACCCAG GCCTGCTGGC CCCTGTGGTG 001360 001361 GTGCAGCCCA GAAGGTGTGA ATCAGTTTAC ACTGTTCAGT GCCTGAATAA AAGTCACAGG ACAAAGAGG |
Predicted Small Protein
Name | NONHSAT017414_smProtein_1178:1267 |
Length | 30 |
Molecular weight | 3348.8599 |
Aromaticity | 0.137931034483 |
Instability index | 87.6482758621 |
Isoelectric point | 10.7631225586 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.00448683978095 |
Amino acid sequence | MRVWAHPSVLRSCRHYGTAFQAPWPSPPL |
Secondary structure | LEEEELLLHHHLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |