NONHSAT017416
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017416 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1066 nt |
Genomic location |
chr11-:1704499..1706859 |
Exon number |
3 |
Exons |
1704499..1705264,1705424..1705532,1706668..1706859 |
Genome context |
|
Sequence |
000001 AGGGCTGCAG GCACTCCTGG GAGCAGGAGG AGGGTGGCCT GTCCTGGGCA GACCAGCCTC TCTGGGCTGT GTGGCCCCAG 000080
000081 CTCCCTGAGC CCAGAGGGAG GTGAGGGTGA GAAGGCCTGG ACCAGGCAGG ACGCAGCCCC CAGGGCCCCT GCTGGGAAGA 000160 000161 GGTCAGAACC TCCCAAGGAC CCAGAAGGCC AGAACACACT AGAGGGTCCC GGCATCCTGA TGAGTCCACT GTCCCCGCGA 000240 000241 TGGTTTTCAG GGATGGAGAA GGCTCCCTGT CCTCCGCTGG AACCCTGCAG CCGGGCTGAC GAGACCCCAG CGAGACCTGC 000320 000321 AGAACATTAC AGCAGAATGA AGGAGAGCCA GAGGAAGAGG CAGATGTGCT GGCCTGTAAA CAGTCTGATT TCCAATGTAA 000400 000401 ACCAGATTCA GGCCCACGAC ATCAGGTAAA CATCTGCATC AGAGCCCCCG GCCCCCCACC GCCCGGGAGG CCCCGGGGTC 000480 000481 CACACGGCCG ACTCTGGGAC CCGTCACAGT GACCGCCGAG ACATTTCGTA ATTAGGCAAA ATTGATCCTT GCATTCCTTC 000560 000561 CCTAAATCCC AAATCTCTGC AATTTTACTT CTTCTCAAAA ATGAAAACAT TTGGCAATTA GCTGATCCAA GTGAAAAAGG 000640 000641 TAGAGAATGT GCTCTCAACT GGAAAATGCC AATTAAGGAA GCAGCTCTGA CTTCCCACCC GCCCTGGCTA AGCTGGGAGC 000720 000721 TTATCTTCCC CGAGAAGAAT CTGCTGGGAT AAGGGGGCTT GGGAAACACC GAGGGCAGGG CTGCCTCCTC ACCTCCTCAG 000800 000801 CTTCCTCTGA GAGCAGATTA GCCGTGGCCT TGTGCCAGCA GGGCCTGGGT GCCACACCGG GTGGCAGCGG GTGGCAGAGC 000880 000881 CGGGCCCCGC TCCGGCACTG GGATTTGGGG TGGCGGGACC CAGTGGGGCA CCCGCTTGTG GGCAGCACTG AGGGCGGTGA 000960 000961 CGTAGGCAGC GGGTGCCGGT GTCTGCCCCT CCATCTGGCC GGGCTCCCCA CCCTGCTCCT GCAGCCCTGG ACCTCAGGGC 001040 001041 CCATTTGCGG TGCAAGGCGG CTCTTG |
Predicted Small Protein
Name | NONHSAT017416_smProtein_665:751 |
Length | 29 |
Molecular weight | 3218.763 |
Aromaticity | 0.107142857143 |
Instability index | 44.6178571429 |
Isoelectric point | 5.47821044922 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0360007065889 |
Amino acid sequence | MPIKEAALTSHPPWLSWELIFPEKNLLG |
Secondary structure | LLHHHHHHLLLLLLLLLLEELLLLLLLL |
PRMN | - |
PiMo | - |