NONHSAT017498
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017498 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1109 nt |
Genomic location |
chr11+:2228756..2234841 |
Exon number |
4 |
Exons |
2228756..2228872,2228883..2229308,2231165..2231379,2234490..2234841 |
Genome context |
|
Sequence |
000001 ACATCTGCAT GTGCCGCCTC GGTGGCACCT GGGCTTCCTC ACAGCATGGC AGTCAGGCTC CAAGGGCAGC TGCCCGAGAG 000080
000081 CTCCAGGAGG AAGCTGCGTG GCCTCTTATG ATGTGGTCAG GGTGTCCCTT CTACTGTGGT TGTCAGCCTG CCCCAGTTGT 000160 000161 AAGAGGTGGG AGAGGCCCCA CATCTGCGTG TCCACACCAT AATGGGGAAA GGGTACGCAC CACCTTCTGA GAGAGTCATC 000240 000241 TGCCACGGGG TGGCACAAGG TCATGGCATT TCACATGGTT GTCACCCAAA GAAAGCCCTC AGCCGTGGAG CCTTGCCCTC 000320 000321 TCCAGAAGCG TCATAGGAGA TGCCCCGTTA CGTCTGCAGA CAACCCGTGT GGGTTCACAG CCTCCATCAG CAGGTCAGTT 000400 000401 GTTTGTTCCC TCTGAGGAGC AGGAGCAGGG GCCCAGGCAC GCTCCCAGTG GGCACCGAAC ACCTGCTGCT GGTGCCTGCC 000480 000481 CCGCACGTAG GAGGGACACA GCGGTGAGCA GGCGCTGGTC CTCATGCGGC TGCCTGCTGG TGTCCTCCCC AGGCAGATCT 000560 000561 TCAGCCAGTG GCTAGGGCAG CAGGAGAGCC ACTCTCACCA GCCCTCTGGC CACTGTGGCC TCTGCCCAGC TCTAACAGCC 000640 000641 CACCCTGCTC CGCAGCTGTG CCCTTGCGTC CTGTCACAGG GGACCCCGGC GGGAAGGGCA GGGCCTGAGC CGGTCTGCGC 000720 000721 TACCCATGGA GGTTGGCCTC GTTCTTCTTG CTGTGGTTTT TTTTTTTTTT TTTTAAAGAA CACACTTTAA GGTTTATAGA 000800 000801 AAATGGAGCA GAAAGTACAG AAAGTTCCCT GATGCTCTAC CCCCTGCCCA GCCCTCCCCC ATGCCTGCAG TCTCCCCGTT 000880 000881 ACTGGCCTCT TGCATCGCTG TGGCCAGGAA CCCATTGGAC ATTTTTTAAA GTCGCATACT TTTTATTGGG GCAAAAAACA 000960 000961 CATCACATCA ATGTACTGTC CTAAATGTAC ACTGTTTTTC AATGCACAGT TCAGGGGCAT TAGGGACACT CACACTGGTG 001040 001041 TGCAGCCCTC ACTGCCATCC ATCTCCGGAA CCCTTTCATC TTCCCGAGAT GAGACTCTGT CCCCATTCA |
Predicted Small Protein
Name | NONHSAT017498_smProtein_8:229 |
Length | 74 |
Molecular weight | 7900.8986 |
Aromaticity | 0.0821917808219 |
Instability index | 54.6754794521 |
Isoelectric point | 8.80755615234 |
Runs | 11 |
Runs residual | 0.00653999116217 |
Runs probability | 0.0394244511891 |
Amino acid sequence | MCRLGGTWASSQHGSQAPRAAARELQEEAAWPLMMWSGCPFYCGCQPAPVVRGGRGPTSA CPHHNGERVRTTF |
Secondary structure | LLLLLLEELLLLLLLLLHHHHHHHHHHHHLHHHHHHLLLLLLLLLLLLLEELLLLLLLLL LLLLLLLEEEELL |
PRMN | - |
PiMo | - |