NONHSAT017539

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT017539

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2294 nt

Genomic location

chr11-:2965668..2973999

Exon number

4

Exons

2965668..2966876,2970457..2970494,2972489..2972545,2973010..2973999

Genome context

Sequence
000001 TGGAATAGGC CCTGGAGCCT GCTGGAGGCT CGTTGGATCT GACGTGAAAT GGAAGAATAT TGAGAAGCCT TTCCCTGCCT 000080
000081 GATGCCAGTT AGGGTCCTTA GAGCGGAAGG GCGCTGCACC GTGGCCACAT CTCATCCTGG CTGCTGCGTG GCGCCAGGAG 000160
000161 GCTGTGCACA CTGTGTGAAC TCCACACCAG CACAGTAGGG CCCTTCTAAG TTCCACCGAA GTTGGCTCTA AGCAAATACA 000240
000241 TGGTGTGAGC TCAACAAAAT GGGAAATGTT GATAAATGAA GCTGCATTTT CATGCACTAC CCTTGTTATG CAACCAGTAG 000320
000321 TGATAAGGTG GTTTTGCTTT TGGTGTAAGT CTCATGTTTG AAACTTGATT TTTAGTCTGA CCAATGATGT ATTTGGATGT 000400
000401 AGGAGAAACT GATTCAAGAC AATTGACTAA TGGTGGAGGT TCACCTTTGA GCACCTTATT GATCACTTTA AAGATTAAAC 000480
000481 ACCAAAGTTT TAATATATTT CTACTAAGGT TTCTTTTCCC TTTGTATGAG ATGTAAAATG ATACCCAGAT TCCTGTATCC 000560
000561 AATAACATTA TGCTGCTGGT TCGATCAGCC TTGTAGAAAA TTTAAGGAAA ACAAATTCAT CGGTTTACAA AAATCTTTTC 000640
000641 CTGTGTGCCT GCTCCTCGGT GTGAGAACAG CCAGGGCAGA GCTGTGGTGC CAGGTTCCCA GCTGTGTCCA GGGTACACCC 000720
000721 TGGCTGACCA GCTTCCTATC CTATTCCTTG TTTTGCGTGA CTTTCAATTT CCTGGCATGC TTTTAAAATG CGCTGCACAC 000800
000801 AAGCAAATGG CTCCTCAGGC AAGCGAGGCC CAGCAGGCAG CGTGGCTGGA CTTTCTGCTC CTCTTAGGCT TGGTCAGTGA 000880
000881 GTCACTTGAT GGGACTGGTG TCTTGGGCAG GCTGCTGTCA TGTTTTGTAA ACCTAAAAAT GTTTTTCTGT GTTTCTCCAG 000960
000961 TTTGAAGAAG GTGAAGAAGG AGAAGAGGAG GAATTAGAAG GTGACGAGGA GGGAGAAGAC GAGGATGATG CGGAAATTAA 001040
001041 CCCCAAGGTG TAATTTTTGT CTGTTAATCA TTCATACGTT TCTAGAAGGA ACCCAGCCAG CCGGCGGAAT GCAAGCAGCA 001120
001121 GTAGGAAGCG GAGGCGGGTG CCTGGCAGAC CGGCTGTCGG GACTCCAGGC CTGTGGGCGG GGCCTCGGTC CTTGCCGCAG 001200
001201 CACAATCCCG TGGACAGAGC TTACTCCATC TAACTCGTTT TCAAGTGCAT GATTTTCACT TTCACTTTTC CTTTTTCCTT 001280
001281 ATTATTTTGC TTAACTTGTA CAGTGGCAAC TGAAATGCAT TTCAGAAATA GGAGGTTTCG TCCAGCACCC TCTGCAGCCT 001360
001361 TGGTGCCTGT AGCTCTGGAC TTCCCTGGGC CTTTCCCTGT GGGAGGGCCC TGTAGACCAC ATCAGGGTGG GGTGGGGGTC 001440
001441 ACTTGGCAAA AAGGGCCGAG GTCTGGTGAT GTGGTTCCCA GGATCTGGAA CCTCTCCCAC CCCTCCTGCA GTTGGACTGA 001520
001521 ATTCTTCCCT TTCATCCGAA GAAACCCACT TGCTGTTTCC AGCCGCTGAA TCTGCTGAGT GTGCAGCCTG CATCACCTGC 001600
001601 TGTATGCCGA TCATCTCAGA AAGGGCTGTG TAGAGTAGGG CCCTGTTCTC CTTAGGATGT TGCTTCTTGA TTTTTTTTTT 001680
001681 TTTTTAGGGG TGGGTCAGGG TTGTGACACA CCAGCCCAGG TGAGAGCTGC TGCGGGTCAC CTCATATTTA TTTATCCCTT 001760
001761 CTTGCCTGTG AGGACTGCGG CTTTTCGCTG TGGCTCGTCC TTAACGTTTC TGAACCACCT TGGTGCCCTG AGCAGGAAGA 001840
001841 TGTGCCACTT CCTAGCAGGC GCAAGGCCTG TGCGGAAGAA ACGCCGCTCC CTGCCACCAG GGCTGAAGAT GCGAGCCCGT 001920
001921 CCTCATGACG CAGGCGCCAC CCTGCTGCCG GAGCCGGGCT TCGGCAGTCT TCTCCACTGA GGGACTGGGC TGGGAAGTCC 002000
002001 TGCGTTTCAG TGGAGCGTAT GAGCGTCAAG TCCTGCTTTC TCAGTAGCCC CATTGCGGGG CCCCACCATT CATCCTGTCT 002080
002081 GAAGGTCCTG GGTTTGGTGT GACCGCTTGG CGGCTGGTGG GTGGGGTTTT CAAGTGGGTG ACGGCGCTCT CCGGCAGCCG 002160
002161 GGGATGGCCG TGTCCGCACT GACCAGGCCT GTGGAGAGTG CTCGGCCTAA CCTTAGAACA CATTTGTAAC TGAATACAGT 002240
002241 GTTTTCAATT TGTACAGAAT AGTTAGAATA TTCTATTAAA GTGGTGAAAC ATTG
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Predicted Small Protein

Name NONHSAT017539_smProtein_776:964
Length 63
Molecular weight 6711.9763
Aromaticity 0.0806451612903
Instability index 51.5209677419
Isoelectric point 6.50787353516
Runs 9
Runs residual 0.00847926267281
Runs probability 0.0283518812931
Amino acid sequence MLLKCAAHKQMAPQASEAQQAAWLDFLLLLGLVSESLDGTGVLGRLLSCFVNLKMFFCVS
PV
Secondary structure LHHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHLLLEEEEEE
LL
PRMN -
PiMo -