NONHSAT017589
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017589 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
709 nt |
Genomic location |
chr11+:3422989..3430040 |
Exon number |
7 |
Exons |
3422989..3423097,3423843..3423959,3424823..3424882,3426084..3426193,3427729..3427840,3428852..3428927,3429916..3430040 |
Genome context |
|
Sequence |
000001 GGCTGTGACC GTCTATGACA AGCCAGCATC TTTCTTTCAA GAGACCTCTG GACCTGCAGC ACCAACTCTT CATGAAGCTG 000080
000081 GGCGGCACGC ACTCTCCGTT CAGGGCCTGA ACCTGAGGAC CCAGACACGG AGCGGTCGGC CTTCATGGAG CGGGATGCTG 000160 000161 GGAGCGGGCT GGTGATGCGC CTCCGCGAGC GGCCAGCCCT GCTGGTCAGC AGCACAGGCT GGACAGAGTT TGAACAACTG 000240 000241 ACTCTTGATG GACACAACCT TCCTTCTCTC GTCTGTGTGA TAACAGGCAA AGGGCCTCCG AGGGAGTATT ACAGCCGCCT 000320 000321 CATCCACCAG AAGCATTTCC AGCACATCCA GGTCTGCACC CCTTGGCTGG AGGCCGAGGA CTACCCCCGC TTCTAGGGTC 000400 000401 GGTGGATCTG GGTGTCTGTC TGCACACGTC CTGCAGTGGC CTGGACCTGC CCATGAAGGT GGTGGACATG TTCGGGTGCT 000480 000481 GTTTGCCTGT GTGTGCCGTG AACTTCAATT TACATGAGCT GGTGAAACAT GAAGAAAATG GCCTGGTCTT TGAGGACTCA 000560 000561 GAGGAACTGG CAGCTCAGCT GCAGGTGCTT TTCTCAAACT TTCCTGATCC TGCGGGCAAG CTAAACCAGT TCCGGAAGAA 000640 000641 CCTGCGGGAG TCGCAGCAGC TCCGATGGGA TTAGAGCTGG GTGCAGACTG TGCTCCCTTT GGTTATGGA |
Predicted Small Protein
Name | NONHSAT017589_smProtein_452:673 |
Length | 74 |
Molecular weight | 8437.5588 |
Aromaticity | 0.0958904109589 |
Instability index | 49.1547945205 |
Isoelectric point | 5.00103759766 |
Runs | 13 |
Runs residual | 0.0339372514361 |
Runs probability | 0.0377821260174 |
Amino acid sequence | MKVVDMFGCCLPVCAVNFNLHELVKHEENGLVFEDSEELAAQLQVLFSNFPDPAGKLNQF RKNLRESQQLRWD |
Secondary structure | LEEEELLLLLLLLEEEELLHHHHHHLLLLLLEEELHHHHHHHHHHHHHLLLLLLLHHHHH HHHHHHHHHHLLL |
PRMN | - |
PiMo | - |