NONHSAT017607
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT017607 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1112 nt |
Genomic location |
chr11-:3620825..3621936 |
Exon number |
1 |
Exons |
3620825..3621936 |
Genome context |
|
Sequence |
000001 ATGTTCCTTG TGAATTGCTT GCATCCAGCA TTAAGGGCTG GTTTTTATCT TTTATTTTTC CAATCCTCTT TCCTTCTCAA 000080
000081 GGTGTCCAAG ACACACAGAG CCATGGAATC TCACAGATGT CTGAGAATTC CTCCTCCTGG GACTCTCAGA GGATCCAGAA 000160 000161 CTGCAGCCGG TCCTCGCTTT GCTCTCCCTG TCCCTGTCCA TGTGTCTGGT CATGGTGCTG AGGAACCTGC TCAGCATCCT 000240 000241 GGCTGTCAGC TCTGTCTCTC CCCTCCACAC CCCCGTGTAC TTCTTCCTCT CTAAACTGTG CTGGGCTGAC ATCGGTTTCA 000320 000321 CCTTGGCCAC GGTTCCCAAG ATGGTTGTGG ACATGCAGTC GCATAGCAGA GTCATCTCTC ATGCGGGCTG TCTGACGCAG 000400 000401 ATGTCTTTCT TCATCCTTTT TGCATGTATA GAAGGCATGC TCCTGACAGT GATGGCCTAT GACTGCTTTG TAGCCATCTG 000480 000481 TCGCCCTCTG CACTACCCAG TCATCGTGAA TCCTCACCTC TGTGTCTCCT TCCTTTTGGT GTCCTTTTTC CTTAGCATGT 000560 000561 TGGATTCCCA GCTGCACAGT TGAATTGTGT TACAATTCAC AATCATCAAG AATGTGGAAA TCTCTAATTT TGTCTGTGAC 000640 000641 CCCTCTCAAC TTCTCAAACT TGCCTGTTCT GACAGCGTCA TCAATAGCAT ATTCATATAT TTCAATAGTA CTATGTTTGG 000720 000721 TTTTCTTCCC ATTTCAGGGA TCCTATGGTC TTACTGTAAA ATCGTCCCCT CCATTCTAAG GATTTCATCA TCAGATGGGA 000800 000801 AGTATAAAGC CTTCTCCACA TGTGGCTCTC ACCTAGCAGT TGTTTGCTGA TTTTATAGAA CAGGCATTGG CATGTACCTG 000880 000881 ACTTCAGCTG TGTCACCACC CCCCAGGAAT GGTGTGGTGG CGTCAGCGAT GTTCTCTGTG GTCACCCCCA TGCTGAACCT 000960 000961 TTTCATCTAC AGCCTGAGAA ACAGGGACAT ACAAAGTGCC CTGCGGAGGC TGCTCAGCAG AACAGTCGAA TCTTATGATC 001040 001041 TGTTCCATCC TTTTTCTTGT GTGGGTGAGA AAGGGCAACC ACATTAAATC TCTACATCTG CAAATCCTGC CC |
Predicted Small Protein
Name | NONHSAT017607_smProtein_611:778 |
Length | 56 |
Molecular weight | 6046.097 |
Aromaticity | 0.163636363636 |
Instability index | 44.9381818182 |
Isoelectric point | 9.03497314453 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0923644232468 |
Amino acid sequence | MWKSLILSVTPLNFSNLPVLTASSIAYSYISIVLCLVFFPFQGSYGLTVKSSPPF |
Secondary structure | LEEEEEEEELLLLLLLLLHHHHHHHHHEEEEEEEEEEEELLLLLEEEEEELLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii |