NONHSAT017656
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT017656 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
828 nt |
Genomic location |
chr11-:4815008..4816514 |
Exon number |
2 |
Exons |
4815008..4815466,4816146..4816514 |
Genome context |
|
Sequence |
000001 CTTCTTGTGT CTTTCCAGGG TGGCAGATTT CCCAATTCTG GATCCGTTTC CTGTGCTTTA TCAGCTGTTG TTGTGGCTGC 000080
000081 TGTATTTAAT ATTGCCCTTC TTTCATGTGA CCTGCATTAA CTACTTCTAG GAACACATAT ATTTCTTTCT GATGCTTCTA 000160 000161 AGTTTGATGA GTGAGGTGGT CTTACACATA ACCTAAGACA TTATCCTTTT ATTGGTTCTA AGCCCATAAA TTCAACTTCT 000240 000241 ATAGCTGCCT GAACCATGCT AGTCTGATTC ATTCATACTC TCTCCCATGT TGGTCAGAGG TGGTCATGAG ATGTTCCCAT 000320 000321 CTGGACAGTA GAGGTGTTCA TCTGCTTTCC ACCTCACCCT GCCATTTTGC CCTTTTGCTT CATGTTCTCC TAGATGCCCT 000400 000401 TCTGCCTCAG CTAGATCTTG CCCTAGACCT ACTATGAGCA AGTGGTCATG CTGAATCTGG TATGTGCAGA CATCACATAT 000480 000481 ATAGTCCGTA CCTGTGGTCT CTTATGGCCT TTTCTGTGGT TGGATTTGAT ATATTTGTCA TTAGAACCAC AGATATCAGA 000560 000561 CATTGCAGGC TGTACTGTAG CTACCTGCAG AGAATCTCTG CCCAAGGTAT TTAGCATATA TGCCTTCCAC ATTTGTGTCA 000640 000641 CCCTGTTCCT GCACATCTCA GTATTCTACT CCTTTTTCTC TTGTTGCTTT TGCTACCATA CACTCACAGT GATTCCCATC 000720 000721 TCCTTGCTCA TCCTTTACTC ATTAGTGCCT TCCATGTTCA ATACCATCAC CTGTGGGGTA AAGAGTAAGC ATATCCAAGA 000800 000801 AAACATGGTA CAGAGATTTT GTGGGAAA |
Predicted Small Protein
Name | NONHSAT017656_smProtein_461:613 |
Length | 51 |
Molecular weight | 5968.9766 |
Aromaticity | 0.16 |
Instability index | 47.876 |
Isoelectric point | 9.05621337891 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0365328563858 |
Amino acid sequence | MCRHHIYSPYLWSLMAFSVVGFDIFVIRTTDIRHCRLYCSYLQRISAQGI |
Secondary structure | LLLLLLLLHHHHHHHHHHEELLLEEEEELLLLHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiii |