NONHSAT017718
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017718 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
672 nt |
Genomic location |
chr11-:6452625..6453549 |
Exon number |
3 |
Exons |
6452625..6452700,6452871..6453033,6453117..6453549 |
Genome context |
|
Sequence |
000001 ACACCTGAAA TCCTTAGGGA GTGCCCGCCA ACCCCATGAT GTTGGCCTTA CCTGGAAACT TAGCCACTGT TTTCCACACT 000080
000081 TGCCTTTCTT TCAGGCACCT GCTGATTCCA GTTTCAGCCA GGGCACAGTG CCCAACATTG CTGACCAAGT CTTGCTCTAT 000160 000161 TTCTCCTTCT CACCTGGCCT CTTCCATCTT GGCCTCTGGA TGCATTCTCT CCCTCTCATG ACTCATTTCT GCATTCATCA 000240 000241 CTAGCCTCTT CTCTGCCTGG GCTTCTGCCA GCGGCCCTAG AGCAACCTAT GGTATTCCAC AGGGACCCAC TACTGGCGTC 000320 000321 TGGACACCAG CCGGGATGGC TGGCATAGCT GGCCCATTGC TCATCAGTGG CCCCAGGGTC CTTCAGCAGT GGATGCTGCC 000400 000401 TTTTCCTGGG AAGAAAAACT CTATCTGGTC CAGGGCACCC AGGTATATGT CTTCCTGACA AAGGGAGGCT ATACCCTAGT 000480 000481 AAGCGGTTAT CCGAAGCGGC TGGAGAAGGA AGTCGGGACC CCTCATGGGA TTATCCTGGA CTCTGTGGAT GCGGCCTTTA 000560 000561 TCTGCCCTGG GTCTTCTCGG CTCCATATCA TGGCAGGACG GCGGCTGTGG TGGCTGGACC TGAAGTCAGG AGCCCAAGCC 000640 000641 ACGTGGACAG AGCTTCCTTG GCCCCATGAG AA |
Predicted Small Protein
Name | NONHSAT017718_smProtein_35:220 |
Length | 62 |
Molecular weight | 6381.6002 |
Aromaticity | 0.0327868852459 |
Instability index | 45.9918032787 |
Isoelectric point | 8.96820068359 |
Runs | 8 |
Runs residual | 0.0216694931223 |
Runs probability | 0.0250176647235 |
Amino acid sequence | MMLALPGNLATVFHTCLSFRHLLIPVSARAQCPTLLTKSCSISPSHLASSILASGCILSL S |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHEELLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLEELL L |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLL L |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiTTTTTTTTTTTTTTTTTTooo o |