NONHSAT017764
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017764 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2194 nt |
Genomic location |
chr11+:6769362..6771555 |
Exon number |
1 |
Exons |
6769362..6771555 |
Genome context |
|
Sequence |
000001 AGGTGTGGAG AGCTCTGGTG CATGAGAACT TTATTTTTCA TTTCAGGAAC ATCCAAGAAG TCATGGCCAT GAGCAAACTG 000080
000081 GAAACCATGT GTAACCCCAC TGGACCTGGG AGCTGAAGAA TCATGTGTTT GGCTAACGGA ACCAGCTGAC CAACCAGATT 000160 000161 CAGAAAAGAA AAATTCAGAC ACTCGAAACA AGCATATTTG AGGCTCCAGT TACAGAAGAA TATGAAGCCA TCAAGCAAGA 000240 000241 ACTTGAAACA CATTTTAATG AAGACCCAGA GAATAAAATA TAAGTTCAAT GGAAACATAA GTTAAATTTT GAAAAATGAG 000320 000321 TTCAATTTTG AAAATAAGCT AATAATCCTT AAAGAGCAAC TTCTTTCAGA CAGCAAAAGA AAAGCCAATG AACTTATTCG 000400 000401 TTTTTTAAAA AATTTAAGAA AGACTGGATA AGAAAAAGAG AGATTATAAA AACAAACTAT TGGAAAGGAG CCGAAAATTG 000480 000481 TTTTTAATTG TAAAGGCTAA AAAGTTGAGT GAGGAAGACT TACATGAGAA ATTCAATCAA TGTCGGAAAA AAAGGGTCTG 000560 000561 TGATGTGTCC ACAACTCTTC CTAAAGTCAC AGAGCCTGAC ACTGATTTGG ATTCTGAAAA CATCCTTTCA GAGTATTTAA 000640 000641 AACATGAGAT GGATGTCATG GACATACTAA CAAGAAATTC TGCAGAGAAG TTTCAAATCA ATTATGACAA ATATGTCAAA 000720 000721 ATGAATAAGA AATGTAACAA TTTTGAAACA ATGTGATCAG TAGTCATATT CATGAACTCT TTCTCAATGA CATTAATAGT 000800 000801 CAGAAAAAAA TTACAGGTAA ATGACATTAA TCGTCCTTGA GAAAGAGTTC ATGAATATGA CTACTGATCA TATTGTTTCA 000880 000881 AGATTTAATA AAACTATTAA CAATATTTGG AAAAAGCAAT GTGATTACAA TCCAAATACA TCCAGAAAAT TCTAAAGACA 000960 000961 ACAGAGGAAG AAGTGAAACC TGCATCTACT CAGGAAAGAT ACACatttaa aaataaatat attatCAGCT TATGCTTGTG 001040 001041 TTTATTCCAG TGAGCAACAG AGAATTCTAA AGAAATGCAC AGGGCATTCA AGAGAGCAAA TGATCCTGTA AACTATCTAG 001120 001121 AAAGCAAGAA AAATGATTTC TTGATGAGGT TTAAGATTTC CTGCCAAGAA GCAACCTCCA GCAAAACACT TACTGATTTT 001200 001201 CTGGGGCACA AGCTCGTTCC TGCTGTCTCT ACCATCATAT GGGGGAAAAA TAACCATTAA AATTGTGGGG ACATGTGAGC 001280 001281 TACCTGCCCT GCATTCAGTG AAAACAGGAC TAACCTGGAG AAACACATTC TCGTCTCTCT GGGAGAAGAA GAAAACTTTG 001360 001361 ATCATTACTG GCAATACTTT CATAATAAGA ATAGCTTTTT AAGGAATTAC ATCAAAATCA ATATTAAGAG ATACTGTTTA 001440 001441 GACAATGCAG GTAAAAAAAT GAAGATTTTT TTGAGAAAAG TTTAGTTGAC ATTAATAATG GCATCCTCCC TGCCCTTCAT 001520 001521 GAATCCACAT CAGTAGCTAA AGATAAAAGC AGCACTGCTT CTGGTGGTTG GATTTATTCT GTGATCGCCT GGAGAGCAAC 001600 001601 TTGATCTTTC CACAGAGAGA CTTGACAAGG ATTAAACACC AGGAGATAAA AGATACTGAG TTTCTCAGAG AAGACATGAG 001680 001681 TGCGGCTTTG GATCTCACAA TGAGGAGAAT AGAACAGCAT TATTCAAGTA TGCCTATGGA AGTAATGGTT TCTAAAACTG 001760 001761 AGAAAATGCT CTCTGAACAT CTCTGTGGCT GCTGGAAACA GTGTCCCTGC TGTGAAGCAA TTTGTACAAA CACAATTCCT 001840 001841 ACACACGAAG GAGACCATGG TGTTCCCTTC CCCTGTCCTC AGGCTGTCTA TGGAGAGGAA TAGTATAAAA CAGGCCATTC 001920 001921 TGTCATGGCT TGCTCTACTA GTTTTGTAGC AAGTGATTGT TTATTGGTTT TGAGCAATGA TGGAAAAATC CCATATAAGT 002000 002001 ATCAAAAGGC AGGAGTGGAT TATGCCACGG GGAGCATCCC TCCAGATTCC TCCACCCAGC CATCTTGGAA ATGGTTTCTT 002080 002081 TCTCACTTCA GATCAAAGCT AGAATATAAA TATCAGGAAA AAAAATTACA GGTAATGGTA AAATCCCTAA CTCATGGGCC 002160 002161 AAAATCCAAA AGAAGGACAT CCTTGAAGAT TTGA |
Predicted Small Protein
Name | NONHSAT017764_smProtein_1976:2101 |
Length | 42 |
Molecular weight | 4653.3245 |
Aromaticity | 0.0731707317073 |
Instability index | 62.4390243902 |
Isoelectric point | 8.38421630859 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0159991924698 |
Amino acid sequence | MMEKSHISIKRQEWIMPRGASLQIPPPSHLGNGFFLTSDQS |
Secondary structure | LLLLLLEEEEHHHEELLLLLLLLLLLLLLLLLLEEEELLLL |
PRMN | - |
PiMo | - |