NONHSAT017790
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017790 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(S),sense |
Length |
602 nt |
Genomic location |
chr11+:7598348..7678208 |
Exon number |
3 |
Exons |
7598348..7598663,7676645..7676679,7677958..7678208 |
Genome context |
|
Sequence |
000001 AGACAAGGAA TTTTCTTCAG GACTGTTTCC CTCTGGCAGG CTCCGGTATT ATCACTGAGA ATGGTCCCGT GTGTGTGTGC 000080
000081 GTGTGTGTCA TGTTTACAAC TTCTGTCCAA GTCTTCTTTC TTTTTTCTCT ACCTTTGTGT GACATTTGAT TTCTCCGCAG 000160 000161 GGCTCTGAAT CCCAGTCCTG gtgcgtgtgc gtgcatgtat gtgcgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtttgt 000240 000241 TGGGGTGGTC GGGGAGGACA CTGAAGCAGC ACGGTCTGCT CTGTGTCGCT GTGTGTCTGA AACTGTCTAG GGAGAGGCTG 000320 000321 CTGCCCATTT TACAGATGGC ACCTTCGGAA GACAATGCTG AGCCAGGACC AGCTGCTGAA TGACTCTCGC CTGCCTGCCC 000400 000401 CCAACTCTGA TGACTGGAGA TGACTTTCTT CGTGGCTGAG AGCGTAGGGA GGCATGTGTG GGGGCCCCGG AGCCTTTGCT 000480 000481 TCTGTGGGGA GCGGGCACAC AGCCCCCTCT GCAAGCCCAG TCCGGGCTGG CAGGGTGTCT CAGACAGGCT GCTGACAGGC 000560 000561 ATGAAGCAGA GCTGTGGGAC AGGTGTCCAG GGGTGGCCCC AG |
Predicted Small Protein
Name | NONHSAT017790_smProtein_194:382 |
Length | 63 |
Molecular weight | 6744.0947 |
Aromaticity | 0.0322580645161 |
Instability index | 49.0193548387 |
Isoelectric point | 7.55047607422 |
Runs | 11 |
Runs residual | 0.0237788018433 |
Runs probability | 0.0430136018373 |
Amino acid sequence | MYVRVCVCVCVCVCLLGWSGRTLKQHGLLCVAVCLKLSRERLLPILQMAPSEDNAEPGPA AE |
Secondary structure | LEEEEEEEEEEEEEELLLLLHHHHHLLEEEEEEEELLLHHHLHHHHHLLLLLLLLLLLLL LL |
PRMN | - |
PiMo | - |