NONHSAT017850
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017850 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
808 nt |
Genomic location |
chr11-:8496195..8615532 |
Exon number |
3 |
Exons |
8496195..8496613,8602361..8602507,8615291..8615532 |
Genome context |
|
Sequence |
000001 TGGAAAAACG GGCCTCTGGG TATCTCGCTG CCGGCCGGCT GGTAACCCCC CAGCGGAGGG ACCGGGCCGA GCCCGCGGAC 000080
000081 CCCTCCGAGT GTCTCCTGGG GCCCAGCCGT TGGTACCCCA TTTCCCCCGG GTCCGGTATT TGGGGTGGTC TCTGTCTGCC 000160 000161 CCGGTTCATC TCCACCGTCT CACCTTCACC CCATCTTGGG ACGTGAAACT TTTTGAAAGT TTAGAAGCGA ACTTACTGTG 000240 000241 GGACCAACTT GCTTCCAGAT TGCTTACACC TGGGGAGACA ATACCACCAT GAAGATGACA GATAACCCAC GATGAAGTGC 000320 000321 TAAGTTGTTT GCTATGGTAG TAGCTGGAAT TCAGAGGGGA GAGACTTATG GCTACCAGAT CCAAGATAGC TCTCACGTGT 000400 000401 GAATATGTGT CTAGTGCATC CTTAACCTGA GGACTTCACC AGTTCGAAAT TACAGTTTTC ACCATCAACT ACCTTATCCT 000480 000481 TTTTGGCCTG GTTTTCTTCC TCAAACAGTG GAAACATTTT TAAAGTTGCT TTTGTTGCAG AGTTAAACAA ATGGCTGATA 000560 000561 GTGGCTTAGA TAAAAAATCC ACAAAATGCC CCGACTGTTC ATCTGCTTCT CAGAAAGATG TACTTTGTGT ATGTTCCAGC 000640 000641 AAAACAAGGG TTCCTCCAGT TTTGGTGGTG GAAATGTCAC AGACATCAAG CATTGGTAGT GCAGAATCTT TAATTTCACT 000720 000721 GGAGAGAAAA AAAGAAAAAA ATATCAACAG AGATATAACC TCCAGGAAAG ATTTGGTAAA TATCAAAGAT TCCACATCTA 000800 000801 AGCACAAG |
Predicted Small Protein
Name | NONHSAT017850_smProtein_617:712 |
Length | 32 |
Molecular weight | 3924.5991 |
Aromaticity | 0.258064516129 |
Instability index | 59.7483870968 |
Isoelectric point | 9.62664794922 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0274863098393 |
Amino acid sequence | MYFVYVPAKQGFLQFWWWKCHRHQALVVQNL |
Secondary structure | LEEEEELLLLHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |