NONHSAT017908

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT017908

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2843 nt

Genomic location

chr11+:9081856..9088694

Exon number

2

Exons

9081856..9082082,9086079..9088694

Genome context

Sequence
000001 GGGGTATGGA GGGTATGTTG CCTTTATCCC CATATGTTAG CGGCATGGGC CCTCCCTCCA TAACAGGGCA CCCAGTCTCC 000080
000081 CTGGGGAGGT GAAGGCTACC TTTACATGTC TTCCCATCCA ACTGGAGAGT GAATCCAACA GGACAACTGC AGTGGACACC 000160
000161 TGTCGAAGTA TCCTTACAGG TGCGGTCACA GCCTCCATTG TTGACAGCAC ACGTTTCTGG CAAGGAGaaa tatgggggag 000240
000241 gaggagccag aagaagaaac agctcgaaga attgactatt gttgcctctg gcaaatggga tgaggaaatg ggaagttatg 000320
000321 agacaaggaa atgatgagtt tcattacaag cctagaagta ATTAAGCGTT TATGTTACTC ATTTGTACTA TTTTCACTTA 000400
000401 AGACAATGAA AATTTATAAT TTCTAAAGAG CAGAAAAGAG CTCGGAAAGG TTACCTGCTT GGTAACCAAT GGCTGTATGA 000480
000481 TATGTTGCCT GACTGTTAAA TCCAGAAACT GTCAAAAGAT GGGTTTTGTT TAGGTTGAGC CAGACTTTCT CCAGAAGGAG 000560
000561 TAACGCACCA AAGGATCTGT CTGACTCCCA CCCCCATGAC CACCTCTATT TCTGCTCATC TCCAGCTTGA CCGCTGGACC 000640
000641 TTCAGGCAGG TCTTCCCTTG TCCCACAGCC AAGTGTTGCC CCTCTCCATT CATCTCTTCT ACTATTATCA TCAGCTGAGT 000720
000721 CAGAAATAGA AGACTCAGTG GACACAAAAA AAGACTAGCT GCCATTCTGA GCTAGAGGCT GCTTCAGAGG AAGACAGCTG 000800
000801 ACttcactga ccacccactc agtcccaggc actggactct gggcaccttt ccatattatt atcttaattg agcatcccaa 000880
000881 ctgatatggc caggctttat gtccccactc aaatctcatc ctgaattata atccccataa tcccctcgtg tcaagggaga 000960
000961 gaccaggtgg aggtgattgg attatggggg cggttcccat gctgttctca tgatagagtg agatcatgag atctcatggt 001040
001041 tttacaagtg tttggtagtt cctcctgcat ttattctcct tcctgccacc ttgtgaagaa ggtaccttgc ttcccctttg 001120
001121 ccttccacca tgattataag tttcctgagg cctccccagc catgtggaac tgtgagtcaa ttaagcctct ttctttatca 001200
001201 attacccagt ctcaggcagt tctttacagc agtatgaaaa tgggcgaata ccctggccct aagaggtaga ctttattaca 001280
001281 tccatttcaa agaaagacca agagacagag cctcagggca gtttgccaag tcttacagct aggtgggggc tgcattggga 001360
001361 cgttaacctg attattctgA TGGACACGAG ACCAAGGGTC TTGCTTGGTT GGTGATTAAG CAACAGCACT GGTGAAGAAC 001440
001441 AGACACACAC CCTGGTTCAC AGGAGCTGCT CACCCCAGTC CAGCTGGTCT GAGGGCATGT GGCTCCCAAG TTCAGGTCTG 001520
001521 ATGCAATAAG TTGGGGAGGG AAAAGGACAA TTGCAGTGGC CAAGGAAAGG GAGTGAAGGT GCCTACCCAT GAGCAGCCGC 001600
001601 CGTTTCACCC GTTTATCCCC ATCCACCACT GATGTGGTGT TGCTCTCTGT CACCTCCAGG ACAGTGTCCT CTCGCTCTAC 001680
001681 AAGAGAAGCA AAAGAGCACG GTTCTCAGAC TGAATGAGTT AGATTGCTCA TCCCCATACA ACTGTGTTTG CTGAAATCCC 001760
001761 AGACATAAGA GGAATGAAAG ATATGTGACT CTGTTCACGC AATAAAAATG TGTTGTAATG AGGCTCTGTG GGAGACACAG 001840
001841 CCCGTTAAAG GGCCACAGAT CCTTAGCAAA CATTAAACAT GGAAAAGATT TTGGAGGTAT ATTGCACTGA CCAAAGAGAC 001920
001921 ACTAGGGAAT GCAAGCTTCA GTCCCCTGAG TCGAGGAGAA AAAGAGCCTT GGGCCTGGAA ACCTCTAAAA TGGAGCTAGT 002000
002001 GAAGGACACA CCGTGAAGGG CAAGGCAGGC ATCCCGCCAG AAATATACGG CCCTGGCTCC TGCTGGCCAG AAGTGCCGCA 002080
002081 TCATTATAAA CAGCTCTAAC TTCGTGCTGC CCTGGCCTCC TGGGAGGTGT TGTGCCAGTC TCTGGAATAC CAGCGTTAGG 002160
002161 AGCAGCCTAG TCCAGGAGAG GAGGAAGGGC TTCCCAAGGT CACACAGGGA GAGAGGGGCC TTCCCCACAG GCCTAGACCA 002240
002241 CTCCCACTGT AGCATGCGAA GCAGCACAGG GCCTGCTGGG GGGGCAAATG CACAGGAAAC AGCCTGCATC TGTGCTAAAC 002320
002321 ACCATTAAGG GGTAGGGGTA GGGACAGGCA GGCTGGTGCA GACCCTCACT CAGTGTTGGG GTTGCCACTC ACCAAGGCAG 002400
002401 CTCCTCCCAT CTGTGTGCAT CTTGTACTGT GGATGGCAGC TGCACTCTGG GCCATCGGCT GTATCGTCAC AGGAGTGCTG 002480
002481 GCACCCACCG TTCCCATGGT TACAGGTCAC TGACAGCAAA ATGAATCAAT ACATAAAGCA CTGAGATTTC CACAAACACA 002560
002561 GGGCTGTGTT TGCTCCAGAG AAATTCTGAT Tttcattctg caagtatttg agcacctagt gcatgccagg catggtgcac 002640
002641 gaaagacata actccaagtc agaccctgtG GTGTCTGTGT ATGCAGATAG TTACAATACA AATTGTAGAA ATGCTGAAAC 002720
002721 ATGGGTTTAA ACAAAGTCAT ACAGGAAGAG GGAGATGGGA GAGTTGGGGG AGAGACTTTT ATTATATAAG GGAGATTATA 002800
002801 CCAAGAGATT CTAGACTACT GCTTTGTTCT ATCTAGAGAA GTT
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Predicted Small Protein

Name NONHSAT017908_smProtein_1631:1753
Length 41
Molecular weight 4446.1783
Aromaticity 0.05
Instability index 65.365
Isoelectric point 5.92303466797
Runs 7
Runs residual 0.00302419354839
Runs probability 0.0467358114417
Amino acid sequence MWCCSLSPPGQCPLALQEKQKSTVLRLNELDCSSPYNCVC
Secondary structure LEEEELLLLLLLLHHHHHHLLLEEEEELLLLLLLLLLLLL
PRMN -
PiMo -