NONHSAT018126
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018126 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
697 nt |
Genomic location |
chr11-:14495556..14497421 |
Exon number |
2 |
Exons |
14495556..14496161,14497331..14497421 |
Genome context |
|
Sequence |
000001 GGCCAGTTCA GAAATTGGTT ACTGAAATGG GTACCTATGC AACTCAGAGT GCCCTTAGCA GTTCTAGACC CACCAAGAAA 000080
000081 GAGGAAGACA GACCTCCCTT GAGAGGATTC CTTCTGGATG GAGATTTCTT TGTTGCTGCC TCCCTTGCCA CAACTCTGAC 000160 000161 CAAGATTGCA TTGCGCTATG TAGCTTTGGT TCAGGAGAAG AAAAAGCAAA ATGTAAGTTC atttatttta catttaacca 000240 000241 acaattaaac attgagtgcc tactatatgc attgaacagt gagggactca aaaattaatg ctaagtttct gtcatgaaag 000320 000321 agtttatgat ttaatagcag aagtggacac agtaaTATAT TACTCTAAAA TTGATAAAGT ATCTTCCTCT TCTGTTTGGG 000400 000401 CTTTAAAAAA ATGAAAATTG ACAAAGTAAT ACAATAACAA TGTCATGTGA TTATTCCAGT GGAAGAGAAA GGATTTATGA 000480 000481 AGTCACCTCA GTTTGCTGGG ATTAGTTCAG GACCAGTGAA GGAAATGTCC TTCTCTCCAG CATCTGCATC CATTCGGTCA 000560 000561 TTGTCTGTTT TATCCCAGAA TGTCTCTTAA GTTATTCTCA TCTGTAGTTC ATGCCTGCTT TGTAGCTTCT GACCGTTCTA 000640 000641 ACCAAACACC CATTTACAAT GGTATGcagt tggtcctcca tattcacagc ttctgca |
Predicted Small Protein
Name | NONHSAT018126_smProtein_26:247 |
Length | 74 |
Molecular weight | 8086.1968 |
Aromaticity | 0.0821917808219 |
Instability index | 48.8109589041 |
Isoelectric point | 9.77313232422 |
Runs | 10 |
Runs residual | 0.00715863897481 |
Runs probability | 0.0202967673556 |
Amino acid sequence | MGTYATQSALSSSRPTKKEEDRPPLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKK QNVSSFILHLTNN |
Secondary structure | LLLLLLLHHHLLLLLLLLLLLLLLLLLEEELLLHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLHHHEEEELLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL LLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooo ooooooooooooo |