NONHSAT018147

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT018147

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1024 nt

Genomic location

chr11-:15009217..15010240

Exon number

1

Exons

15009217..15010240

Genome context

Sequence
000001 TTAAGTCCTG GTTTTTATCT TTTATTTTTT CCAATCCTTT TTTCTTCTCA AGGTGTCCAA GTCACACAGA GCCACAGAAT 000080
000081 CTCACAGGTG TCTCAGAATT CCTCCTCCTG GGACTCTCAG AGGATCCAGA ACTGCAGCCA CTCCTTGCTG GGCTGTTCCT 000160
000161 ATCCATGTGC CTGGTCACGA TGCTGGGGAA CCTGCTCATC ATCCTGGCCG TCAGCCCTGA CTCCCACCTC CACATCCCCA 000240
000241 TGTACTTCTT CCTCTCCAAC CTGTCCTTGC CTGACATTGG TTTCACCTTG GCCACGGTCC CCAAGATGAT TGTAGACATG 000320
000321 CAATCACATA GCAGAGTCAT CTCCCATGCA GGCTGTCTGA CACAGATACC TTTCTTTGTC CTTTTTGTAT GTATAGATGA 000400
000401 CATGCTCCTG ACTGTGATGG CCTATGACTG ATTTGTGGCC ATCTGTCACC CCCTGCACTA CCCAGTCATC ATGAATCCTC 000480
000481 ACCTCTGTGT CTTCTTAGTG TTGATGTCTT TTTCCTTAGC CTGTTGGATT CCTAGCTGCA CAACTGGATT GTTACAATTC 000560
000561 ACCTGCTTCA AGAATGTGGA AATCTCTAAT TTTTTCTGTG ACTGATCTCA ACTTCTCAAC CTTGCCTGTT CTGACTGTCA 000640
000641 TCAGTAACAT ATTCATACAT TTAGATAGTA CTATATTTGG TTTTCTTCCC ATTTCAGGGA TCCTTTTGTC TTACTATAAA 000720
000721 ATTGTGCCCT CCATTCTAAG AATTCCATTG TCAGATGGGA AGTATAAAGC CTTCTCCACC TGTGGCTCTC ACCTGGCAAT 000800
000801 TGTTTGCTTA TTTTATGGAA CAGGCATTGG CATGTACCTG ACTTCAGCTG TGTCACCAGC CCCCAGGAAT GGTGTGGTGG 000880
000881 CATCAGTGTT GTACGCTATG GTCACCCCCA TGCTGAACCC CTTCATCTGC AGCCTGAGAA ACAGGGGCAT TCAAAGTGCC 000960
000961 CTGTGGAGGC TGTGCAGGAG GAAAGTCTAA TCTCATGATC TGTTTCATCC TTTTTCTTGT GTGG
[back to top]

Predicted Small Protein

Name NONHSAT018147_smProtein_164:430
Length 89
Molecular weight 9801.7257
Aromaticity 0.0909090909091
Instability index 43.3227272727
Isoelectric point 5.19757080078
Runs 18
Runs residual 0.0731818181818
Runs probability 0.0642456181671
Amino acid sequence MCLVTMLGNLLIILAVSPDSHLHIPMYFFLSNLSLPDIGFTLATVPKMIVDMQSHSRVIS
HAGCLTQIPFFVLFVCIDDMLLTVMAYD
Secondary structure LLHHHHHHHHHEEEEELLLLLLLEEHHHHHHLLLLLLLLLLHHHLHHHHLLLLLLHHHEE
LLLLLLLLLEEEEEEEEELLEEEEEEEL
PRMN LLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
LLLHHHHHHHHHHHHHHHHHHLLLLLLL
PiMo TTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii
iiiTTTTTTTTTTTTTTTTTTooooooo