NONHSAT018147
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018147 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1024 nt |
Genomic location |
chr11-:15009217..15010240 |
Exon number |
1 |
Exons |
15009217..15010240 |
Genome context |
|
Sequence |
000001 TTAAGTCCTG GTTTTTATCT TTTATTTTTT CCAATCCTTT TTTCTTCTCA AGGTGTCCAA GTCACACAGA GCCACAGAAT 000080
000081 CTCACAGGTG TCTCAGAATT CCTCCTCCTG GGACTCTCAG AGGATCCAGA ACTGCAGCCA CTCCTTGCTG GGCTGTTCCT 000160 000161 ATCCATGTGC CTGGTCACGA TGCTGGGGAA CCTGCTCATC ATCCTGGCCG TCAGCCCTGA CTCCCACCTC CACATCCCCA 000240 000241 TGTACTTCTT CCTCTCCAAC CTGTCCTTGC CTGACATTGG TTTCACCTTG GCCACGGTCC CCAAGATGAT TGTAGACATG 000320 000321 CAATCACATA GCAGAGTCAT CTCCCATGCA GGCTGTCTGA CACAGATACC TTTCTTTGTC CTTTTTGTAT GTATAGATGA 000400 000401 CATGCTCCTG ACTGTGATGG CCTATGACTG ATTTGTGGCC ATCTGTCACC CCCTGCACTA CCCAGTCATC ATGAATCCTC 000480 000481 ACCTCTGTGT CTTCTTAGTG TTGATGTCTT TTTCCTTAGC CTGTTGGATT CCTAGCTGCA CAACTGGATT GTTACAATTC 000560 000561 ACCTGCTTCA AGAATGTGGA AATCTCTAAT TTTTTCTGTG ACTGATCTCA ACTTCTCAAC CTTGCCTGTT CTGACTGTCA 000640 000641 TCAGTAACAT ATTCATACAT TTAGATAGTA CTATATTTGG TTTTCTTCCC ATTTCAGGGA TCCTTTTGTC TTACTATAAA 000720 000721 ATTGTGCCCT CCATTCTAAG AATTCCATTG TCAGATGGGA AGTATAAAGC CTTCTCCACC TGTGGCTCTC ACCTGGCAAT 000800 000801 TGTTTGCTTA TTTTATGGAA CAGGCATTGG CATGTACCTG ACTTCAGCTG TGTCACCAGC CCCCAGGAAT GGTGTGGTGG 000880 000881 CATCAGTGTT GTACGCTATG GTCACCCCCA TGCTGAACCC CTTCATCTGC AGCCTGAGAA ACAGGGGCAT TCAAAGTGCC 000960 000961 CTGTGGAGGC TGTGCAGGAG GAAAGTCTAA TCTCATGATC TGTTTCATCC TTTTTCTTGT GTGG |
Predicted Small Protein
Name | NONHSAT018147_smProtein_164:430 |
Length | 89 |
Molecular weight | 9801.7257 |
Aromaticity | 0.0909090909091 |
Instability index | 43.3227272727 |
Isoelectric point | 5.19757080078 |
Runs | 18 |
Runs residual | 0.0731818181818 |
Runs probability | 0.0642456181671 |
Amino acid sequence | MCLVTMLGNLLIILAVSPDSHLHIPMYFFLSNLSLPDIGFTLATVPKMIVDMQSHSRVIS HAGCLTQIPFFVLFVCIDDMLLTVMAYD |
Secondary structure | LLHHHHHHHHHEEEEELLLLLLLEEHHHHHHLLLLLLLLLLHHHLHHHHLLLLLLHHHEE LLLLLLLLLEEEEEEEEELLEEEEEEEL |
PRMN | LLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL LLLHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | TTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii iiiTTTTTTTTTTTTTTTTTTooooooo |