NONHSAT018237
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018237 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1194 nt |
Genomic location |
chr11-:17515447..17516640 |
Exon number |
1 |
Exons |
17515447..17516640 |
Genome context |
|
Sequence |
000001 GGCCCCCACA CTTGGCCAGA ACCAGGGCTA TTAAGAGGTT TTGAAGGCTG GTCCAAAGAA CCAGGGTTGG TGGATTAGAG 000080
000081 TTGCTCATGT CCTGTTGTGC CCTGTCATGG CCTGAGCCGT GCTTAGACCA AACGGTCTTC TCTGCCTTCT CCCTTCCTTG 000160 000161 GCTCTGGGCT CTATCTGTGG GATATACCGT GGAACCCAGC TGTAGGATGT GTTTCTCACC CTGTGATAGG GATGTGCCCG 000240 000241 TGGACAGAGC TGGCAGGTGG CTGTGAAACT GGTGTTTGGT GTGGCCTGAA GCCACAGATG GCAGCATCTG GGGCAGACCC 000320 000321 AAGCCTGGAC TTGACTTTTC TGTTACAACT TTCCCAAAAC ATTAGGGCCT CATGCTCCCA AGACACTTGG CCGGGTAGAC 000400 000401 CATGGCTTCT GGGGTGGCCT GCATGGCCCT ATGTTTTCTG TTACTTGCCT TTTGCAAAGG ACTCTTGCCC CTGTTCCTCC 000480 000481 CAGTCTCCTC CTTCCCCCAT CCCAGGTGTC CCTCCCGCTT TCTCCCTGGC CTCCTGTGTG CTGTGGCTGT GGCTGGTGTG 000560 000561 TAGCCACTTG GGGCCTGCAC CCAGAGGGGT CTCCAAAGGG TGGCAGGGCC TTGTGCTGCC AGAGTGGGTA CTCCCCCTTG 000640 000641 TGGGGCCTTG CTCTGGCTGG GCTGAGTGTG CACCCACAAA GCCTGTATCC ACCTGGGCTG TTTCCACTTC CCTGCAGGAC 000720 000721 CTTCTTCTGA AGTCCAAAAG GGGAAACCAA ATTCACCGTT AGGAAACAGT GAGCTCCGGC CCCACCTCGT GAACACAAAG 000800 000801 CCTCGGATCA GCCTTGAGAG AGGCCACACT ACACACACCA GATGGCATCC TTGGGACCTG AATCTATCAC CCAGGAATCT 000880 000881 CAAACTCCCT TTGGCCCTGA ACCAGGGCCA GATAAGGAAC AGCTCGGGCC ACTCTTCTGA AGGCCAACGT GGAGGAAAGG 000960 000961 GAGCAGCCAG CCATTTGGGA GAAGATCTCA AGGATCCAGA CTCTCATTCC TTTCCTCTGG CCCAGTGAAT TTGGTCTCTC 001040 001041 CCAGCTCTGG GGGACTCCTT CCTTGAACCC TAATAAGACC CCACTGGAGT CTCTCTCTCT CCATCCCTCT CCTCTGCCCT 001120 001121 CTGCTCTAAT TGCTGCCAGG ATTGTCACTC CAAACCTTAC TCTGAGCTCA TTAATAAAAT AGATTTATTT TCCA |
Predicted Small Protein
Name | NONHSAT018237_smProtein_86:265 |
Length | 60 |
Molecular weight | 6687.7034 |
Aromaticity | 0.135593220339 |
Instability index | 67.7305084746 |
Isoelectric point | 4.52813720703 |
Runs | 11 |
Runs residual | 0.0419841393251 |
Runs probability | 0.0310497663439 |
Amino acid sequence | MSCCALSWPEPCLDQTVFSAFSLPWLWALSVGYTVEPSCRMCFSPCDRDVPVDRAGRWL |
Secondary structure | LLEEELLLLLLLLLLLEELLLLLLHHHHHLLLEEELLLLEEEELLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |