NONHSAT018260
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018260 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
660 nt |
Genomic location |
chr11-:18111043..18112483 |
Exon number |
3 |
Exons |
18111043..18111057,18111722..18111863,18111981..18112483 |
Genome context |
|
Sequence |
000001 tttatttcat atgttgtctc ccctccttga ctgtcttcat gaatccaaat aacctcccag attatgtcta tttattcagc 000080
000081 atgtcctctt aatcctttta cctgcagtat aaagcaacac caaaatatat aaaataataa aactatagtg caaagtaagg 000160 000161 aaatgattgc tggaaaaatc agaatggtca tcatttctag gtgggaaaga gaattgtgat ttggaatgga cacatggtga 000240 000241 ctacaaagat gcagctctgt tctgtttctt ggaaacacga gtgtttgctt tataattatt tattaactat agatttgtat 000320 000321 cttttgagct tttctgaata tatgctgtat ttcacaataa agatgttcaa aaaATTAAAT GAAAACTCTG ATATTTTAAA 000400 000401 TGCGAGAAGT GAGGCATATC GGTTAACTTC TTTGTTTTTG TAGGCAGGTG TTATTGCACT GTTTGTATGA TTCAGACCCA 000480 000481 CCTACTCTGC TGGAAACAAG CAGAAATTCA ACCCACGTTT ACCATGTAGG TTGTTGCTTA CTTGCCTTTC CCAGGCAGAA 000560 000561 GTGGCCAGTG TTTGGGTTGA AAGGATCCAG GAACATCCAG CTATTTATGA TAGCATTTGC TTCATTATGT CAAGTTCAAC 000640 000641 AAATGTTGAC TTGCTGGTGA |
Predicted Small Protein
Name | NONHSAT018260_smProtein_233:442 |
Length | 70 |
Molecular weight | 8303.7296 |
Aromaticity | 0.159420289855 |
Instability index | 40.1608695652 |
Isoelectric point | 7.75286865234 |
Runs | 7 |
Runs residual | 0.0378820490745 |
Runs probability | 0.0350518585814 |
Amino acid sequence | MVTTKMQLCSVSWKHECLLYNYLLTIDLYLLSFSEYMLYFTIKMFKKLNENSDILNARSE AYRLTSLFL |
Secondary structure | LLLLLEEEEELLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHH HHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL LLLLLLLLL |
PiMo | oooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiii iiiiiiiii |