NONHSAT018307

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT018307

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

411 nt

Genomic location

chr11+:18621354..18625427

Exon number

4

Exons

18621354..18621544,18622639..18622711,18624705..18624742,18625319..18625427

Genome context

Sequence
000001 CTCGAACAGA CATGCGAGAC CTCTACCAAC TGAAGGTTTC GTGAGCGCAC TCCTTTGCCA AGATCTTGGT GAATAGTCTT 000080
000081 TCACTGTGCA ATTTTATCTT AGAAATTGTT TTACGTTTGA TCATGATTGT GCTTGGCTGG ATGTTTTTTG TTGGACTTGT 000160
000161 GTGTTACATG GGCACGTTTC CAGAGTTGAT GCCTCCAACT CTGAAGTGGC AGGAGAGGTG GCCTGTTCAG GAGAGCAAAA 000240
000241 CACAACTGAG GAGGCGGGCT TTAGGAACCA TGTGGAAGGG ATATAAATAT CCCCCAGGAG GGACTCCAGT GGAAGTAAGC 000320
000321 AAGGATGATC CTGGTGAAGT AATGCAGCTG TGAAGCTCAC CTGACCAGCT GTACAGTTCC TGTTGTTGGT TTCACATAAA 000400
000401 GTAATTGCAC A
[back to top]

Predicted Small Protein

Name NONHSAT018307_smProtein_122:352
Length 77
Molecular weight 8821.3425
Aromaticity 0.131578947368
Instability index 66.8342105263
Isoelectric point 8.88812255859
Runs 13
Runs residual 0.0296430732002
Runs probability 0.0460709578357
Amino acid sequence MIVLGWMFFVGLVCYMGTFPELMPPTLKWQERWPVQESKTQLRRRALGTMWKGYKYPPGG
TPVEVSKDDPGEVMQL
Secondary structure LEEEEEEEEEEEEEELLLLLLLLLLLLLLEELLLLLLLHHHHHHHHHHHHLLLLELLLLL
LEEEEELLLLLEEEEL
PRMN -
PiMo -