NONHSAT018323
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018323 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
952 nt |
Genomic location |
chr11-:18885105..18886056 |
Exon number |
1 |
Exons |
18885105..18886056 |
Genome context |
|
Sequence |
000001 ATGGATCCAA CCATCCCAGC CTTGGGTACA GAACTGACAT CAATCAATAG GACCGAGGAG ACCCATCTTC AACATTGTGG 000080
000081 CATGGAGATC ATGATCCTCA TGTTGCTGCT CCTCATCGTT GACCTGGTCC AGCTGGCAGG AAATGCAGTC ATTTCCTCTG 000160 000161 GCTCCTGGGA TTCCGCCTGC ACAGGAACAC CTTCTCCCTC TACACCCTCA ACCTGGCCGG GGCCGACTTC TTCCTCTGCT 000240 000241 CCCAGATTTT AGAAATTGTG AATTTCTACC ATGACTTCTT CCTTTCCATC TCCACCTATT TCACCACTGT GATGACCTTT 000320 000321 CTCTACTTTA CAGGCCTGAG CATGCTGGGC TCCATCAGCA CCAAGCACTG CCTGTCCATC CTGTGGCCCA TCTAGTACCG 000400 000401 CTGCCACCAC CCCACACACC TGTCAGCAGT CGTGTGTCCT GCTCTGGGCC CTGTCCCTGC TGCAGAGCAT CCTGGAATGG 000480 000481 ATGTTCTGTG GCTTCCTGTC TAGTGGTGCT GATTCTGTTT GGTGTGAAAC ATCAGATTTC ATCACAGTCA CATGGCTGAT 000560 000561 TTTTTTATGT GTGGTTCTCT GCGGGTCCAG CCCGGTCCTG CTGGTCAGGA TCCTTTGTGG ATCCCGGAAG ATGCCCTTGA 000640 000641 CCAGGCTGTA CATGACCATC CTGCTCAGAG TGCTGGTCTT CCTCCTCTGT GACCTGCCCT TTGGCATTCA GTGATTCCTA 000720 000721 TTTTTCTGGA TCCACGTGGA TTTGTCACGT TCGTCTAGTT TCCATTTTCC TGTCCACTCT TAACAGCAGT GCCAACCCCA 000800 000801 TTATTTACTT CTTCATGGGC TCCTTTAGGC AGCTTCAAAA CAGGAAGACT CTCTAGCTGG TTCTCCAGAG GGCTCTGCAG 000880 000881 GACACGCCTG AGGTGGAAGA AGGCAGATGG CGGCTTTCTG AGGAAACCCT GGAGCTGTCA TGAAGCAGAT TG |
Predicted Small Protein
Name | NONHSAT018323_smProtein_551:691 |
Length | 47 |
Molecular weight | 4897.481 |
Aromaticity | 0.0652173913043 |
Instability index | 59.702173913 |
Isoelectric point | 4.16314697266 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.0418653948065 |
Amino acid sequence | MADFFMCGSLRVQPGPAGQDPLWIPEDALDQAVHDHPAQSAGLPPL |
Secondary structure | LLLEEELLLEEELLLLLLLLLLLLLHHHHHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |