NONHSAT018323

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT018323

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

952 nt

Genomic location

chr11-:18885105..18886056

Exon number

1

Exons

18885105..18886056

Genome context

Sequence
000001 ATGGATCCAA CCATCCCAGC CTTGGGTACA GAACTGACAT CAATCAATAG GACCGAGGAG ACCCATCTTC AACATTGTGG 000080
000081 CATGGAGATC ATGATCCTCA TGTTGCTGCT CCTCATCGTT GACCTGGTCC AGCTGGCAGG AAATGCAGTC ATTTCCTCTG 000160
000161 GCTCCTGGGA TTCCGCCTGC ACAGGAACAC CTTCTCCCTC TACACCCTCA ACCTGGCCGG GGCCGACTTC TTCCTCTGCT 000240
000241 CCCAGATTTT AGAAATTGTG AATTTCTACC ATGACTTCTT CCTTTCCATC TCCACCTATT TCACCACTGT GATGACCTTT 000320
000321 CTCTACTTTA CAGGCCTGAG CATGCTGGGC TCCATCAGCA CCAAGCACTG CCTGTCCATC CTGTGGCCCA TCTAGTACCG 000400
000401 CTGCCACCAC CCCACACACC TGTCAGCAGT CGTGTGTCCT GCTCTGGGCC CTGTCCCTGC TGCAGAGCAT CCTGGAATGG 000480
000481 ATGTTCTGTG GCTTCCTGTC TAGTGGTGCT GATTCTGTTT GGTGTGAAAC ATCAGATTTC ATCACAGTCA CATGGCTGAT 000560
000561 TTTTTTATGT GTGGTTCTCT GCGGGTCCAG CCCGGTCCTG CTGGTCAGGA TCCTTTGTGG ATCCCGGAAG ATGCCCTTGA 000640
000641 CCAGGCTGTA CATGACCATC CTGCTCAGAG TGCTGGTCTT CCTCCTCTGT GACCTGCCCT TTGGCATTCA GTGATTCCTA 000720
000721 TTTTTCTGGA TCCACGTGGA TTTGTCACGT TCGTCTAGTT TCCATTTTCC TGTCCACTCT TAACAGCAGT GCCAACCCCA 000800
000801 TTATTTACTT CTTCATGGGC TCCTTTAGGC AGCTTCAAAA CAGGAAGACT CTCTAGCTGG TTCTCCAGAG GGCTCTGCAG 000880
000881 GACACGCCTG AGGTGGAAGA AGGCAGATGG CGGCTTTCTG AGGAAACCCT GGAGCTGTCA TGAAGCAGAT TG
[back to top]

Predicted Small Protein

Name NONHSAT018323_smProtein_551:691
Length 47
Molecular weight 4897.481
Aromaticity 0.0652173913043
Instability index 59.702173913
Isoelectric point 4.16314697266
Runs 7
Runs residual 0.00918737060041
Runs probability 0.0418653948065
Amino acid sequence MADFFMCGSLRVQPGPAGQDPLWIPEDALDQAVHDHPAQSAGLPPL
Secondary structure LLLEEELLLEEELLLLLLLLLLLLLHHHHHHHHHLLLLLLLLLLLL
PRMN -
PiMo -