NONHSAT018342
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018342 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1369 nt |
Genomic location |
chr11-:19532440..19545625 |
Exon number |
4 |
Exons |
19532440..19533271,19539944..19540142,19541297..19541441,19545433..19545625 |
Genome context |
|
Sequence |
000001 AAATACAGGT TGACAAGTGC TAAGAGAGAA GTCAGAGGCT GTGGGAACAG AGAGGAGGAG TATCTAACCA GCCTGGAGTA 000080
000081 TCTGGAAGAC TTCCTGAAGG AGGAGAAAAC ACCTGGGCTA AATCTTAAAG GAAGACCAGA AGCTACCCAG GGAAAGAAGT 000160 000161 GAAGGAAGGC ATTATAAACA GAGAGGCCAG GAGATTCCAG CCTCAGCATT CCCAGAGAAG GCCCAGGATC TCCCTGAGAG 000240 000241 GCCCAGTTGG TGTTTGTGGA ATCATCACTC CTCTGGTGAT CACGCAGTTT GCCTCACTTT CTCCATGGAG CTCTTTGCTA 000320 000321 AAGGACATTC TCCTCCAGCT GTGAAGGAAA AGCCCAACAA AAGGCAGGGT ACTTTGTTCT AACTGAGGAT GTCTACTGAC 000400 000401 ACAGCCAAGC TGTAAAGCAG ACCACGGACG GCAGTGCAGC GGGGAGAACA ACTCTACATC TGGTTGGAGG TGGAGTAATG 000480 000481 TCCAGTCTGG GCACAGAGAG ATGGCAGGTG TGCAGCTGCA CTCAGCATGG GATAGAGCAC CACCTGCCAG GCCAGAACAG 000560 000561 AAAGAAGGGC GACGGAGACT GGCAGAGAAA CAGCAATTAC TGCTCAGTGA GAAGTAAACA GCGTCTGCTT CCAGAGGCTT 000640 000641 TACGGACCAG AAAGCCCACA GGAAATAGCT CCTGCTTCCC AGCCTGGAGG TCCTCATGCA CTAGCCCTCC CTGCTACAAT 000720 000721 TTTGATGGTT TTTCGCATAT TTACAGAATT GTGCAACCAT CACCATGATC AGTCTTAGAA GAGTTAATCA CCCCTGACCC 000800 000801 CAGAAAACTC TGTATTCATT AGCAGTCACT CCCTTTCCCC TTTCCACCCC TCTCCAACAT TAGGCAACCA CTAATCTACT 000880 000881 CTCTGTCTCC ATAAACTGGT CTATTTTGGA CATTTCACAT AAGCCTCCCT GGATCCCAGT TTAAGCATCC TGGGGTTTGT 000960 000961 CTGCCTGCCA GAGCCATGGT GCCACTGGGG CTACCTGTCC TGTGGGATGA CAAGGCAGGT CCAAACCTTT GCCTGCTCTC 001040 001041 CCATCCATTC CTTTTGTGTT AGTCCATGTG TCTCCCGACT GTTCTCTCCA ACAACAACAC AGACTGACAA AACCTACTGA 001120 001121 CTTGGAGTCA GGAACAGACT TTGCTATTTT CTGGCTGTGT GATCCTGATG AGTCCCTTGA ACCTCCTGGA CTTGTTCCTC 001200 001201 AGCCTAAAAA CCAAGACTAA TAAATCAAGT CTATCTCACA GCCTTACGTG GGGATCAAAA AACATGGAGC ATGTGAACAC 001280 001281 ACATTGTACA TCACGAAGCT GTATGCAAAT AAATATCGTG TAACTCCAGC CCTTTTTGAG TTTATAAATA AAAGTGAAAA 001360 001361 CCTCATAAC |
Predicted Small Protein
Name | NONHSAT018342_smProtein_500:616 |
Length | 39 |
Molecular weight | 4381.9774 |
Aromaticity | 0.0263157894737 |
Instability index | 87.4210526316 |
Isoelectric point | 10.2461547852 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0290054760643 |
Amino acid sequence | MAGVQLHSAWDRAPPARPEQKEGRRRLAEKQQLLLSEK |
Secondary structure | LLLLEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |