NONHSAT018357
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018357 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
668 nt |
Genomic location |
chr11+:20048801..20066537 |
Exon number |
4 |
Exons |
20048801..20049013,20057505..20057643,20065527..20065818,20066514..20066537 |
Genome context |
|
Sequence |
000001 AGTTAGGCTT GCTCACTCAT CCACACCAAA GGATCTCGTT CCGCTCGGGC CCCGGGGTTT CACGGGAACA ATTGCCTTGA 000080
000081 ACAATAGCCA GAAAACGAGT TCCACCAGTC TGGACTTTTT TGCAACTGAA TGCAGCTGTC TGGCGGGGGG CATGGGCCAG 000160 000161 CCCTGTAAAT GGGCTGTGCC TTGATTCTGG AGCAGAACTG GAAAATTGAG CAGCTGGGAC GACAGCAGCT CCGTCAGCAG 000240 000241 CGGCATCAGC GACACCATAG ACAACCTCAG CACTGATGAC ATCAACACCA GCTCCTCCAT CAGCTCTTAT GCCAACACAC 000320 000321 CTGCCTCCTC TCGAAAAAAC CTGGATGTGC AGACTGATGC TGAGAAGCAC TCACAGGTGG AGAGGAATTC CCTGTGGTCT 000400 000401 GGTGATGATG TCAAGAAATC AGACGGAGGC TCAGACAGCG GCATAAAAAT GGAGCCAGGT TCCAAGTGGA GGCGGAATCC 000480 000481 TTCTGATGTG TCTGACGAGT CCGACAAAAG CACGTCGGGC AAGAAGAATC CTGTCATCTC CCAGACAGGC TCATGGCGGC 000560 000561 GAGGCATGAC AGCTCAGGTG GGCATCACCA TGCCAAGGAC GAAGCCTTCA GCCCCGGCAG GCGCACTGAA GACCCCAGGA 000640 000641 ACTGGAAAAA CAGACGACGC AAAGGTGT |
Predicted Small Protein
Name | NONHSAT018357_smProtein_275:445 |
Length | 57 |
Molecular weight | 6292.4345 |
Aromaticity | 0.0357142857143 |
Instability index | 71.0232142857 |
Isoelectric point | 10.6643676758 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0449945744064 |
Amino acid sequence | MTSTPAPPSALMPTHLPPLEKTWMCRLMLRSTHRWRGIPCGLVMMSRNQTEAQTAA |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLLLLLLEEEEEELLLLLHHHLLL |
PRMN | - |
PiMo | - |