NONHSAT018571
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018571 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
743 nt |
Genomic location |
chr11-:29690433..29691175 |
Exon number |
1 |
Exons |
29690433..29691175 |
Genome context |
|
Sequence |
000001 AATCAGGTCA ATGACAATGG GAATCAGTTA AAAAGAAAAC ATGAATCGAT GTGTCTCGTG TCACTCACAC AGAATACTGT 000080
000081 CAGACTGATG GAGGCAGGTC TCCCTTGGAA GCAGGCAGAA AGGGCTAATG AGCTATTTCA GACAGGCTTG GTAATTTATG 000160 000161 TCAACCTTGA TGAACGAGTA CTTAATGCTC TCAGATAGCT CTGTGGGGCT TCAATAGTTC AAAGAAAGTG ATTTGTCACA 000240 000241 TCTTAGGCTC TTAGATATTT CTTTTTATTG ATTATTTGTC TATTCTAGAA CAAAATACAT TTCTGCGTCA AGTTATTAAG 000320 000321 TATGAAGATC AGCAAACAAA GGAAGAAATG TGAGCAAGTT GTGAGAATCC ACAAAAAGAT CTGATGAAGG CTTTGGTTGA 000400 000401 GTGGATCAGC TGTGTGTTGG ACGCAACCAC AGGTCAGAGG AGACAGGACA ATCTTCCTTC AGATGGCATG TACTCTGGTG 000480 000481 CACTGCCTGG AACTGGAACC ATTACTTTTA TTGATAAGAC ACCAAGAGAT TTAACTGAGG ATGAGTTTGT GCTGCTCTTG 000560 000561 AGGATGGACT CGCTTGAGAT CTATATCCTA TGACTAGTCG GAACAGAAAG TATGCATTTA GGATTATCTG TGAAAGGACA 000640 000641 CTGTGCTGTG TGACAGCTAC AGAGTTTGCC CTGGAGTCTG CATTTCTGTG GCTAGCAACA GGCTGGAGTG ATTCCACAAT 000720 000721 GTAAGACAAA GAAAAAGATT CCA |
Predicted Small Protein
Name | NONHSAT018571_smProtein_383:592 |
Length | 70 |
Molecular weight | 7735.7956 |
Aromaticity | 0.0724637681159 |
Instability index | 47.0594202899 |
Isoelectric point | 4.30169677734 |
Runs | 11 |
Runs residual | 0.0200889654183 |
Runs probability | 0.0490758137818 |
Amino acid sequence | MKALVEWISCVLDATTGQRRQDNLPSDGMYSGALPGTGTITFIDKTPRDLTEDEFVLLLR MDSLEIYIL |
Secondary structure | LHHHHHHEEEEELLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLLLLLHHHHHEEEE LLLEEEEEL |
PRMN | - |
PiMo | - |