NONHSAT018617
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018617 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1067 nt |
Genomic location |
chr11-:31473745..31531110 |
Exon number |
3 |
Exons |
31473745..31474639,31477807..31477933,31531066..31531110 |
Genome context |
|
Sequence |
000001 ACCTGTGTCC TGGTTGAGGG TCTCCAGGGT TCTTTGGGGC CCGAGAGGTG ACATTGTGAT TGCAAAAAGC CCAAGTGATC 000080
000081 CAAAATCAAA TATTTGTAAA AGAGTAATTG GTTTGGAAGG AGACAAAATC CTCACCACTA GTCCATCAGA TTTCTTTAAA 000160 000161 AGCCATAGTT ATGTATTTGG AAACTAAGCA GTTCCTATTA AGATGCTGTT GCTggccggc cgcggtggct cacgcctgta 000240 000241 atcccagcac tttgagaggc caaggcaggc agatcacctg aggtcaagag tttgagacca gcctgcccag catggtgaaa 000320 000321 ccctgtctct gctaaaaatg caaaaaatta gccaggcgtg gtggcaggcg cctgtcatct cagctacttg ggaggctgag 000400 000401 gcaggagaat cgcttcaacc tgggaggtgg aggttgcagt gagccgagat cgcgccactg cactgcagcc tgggcaacaa 000480 000481 gagcgaaact ccgtctcaag aaaagaaaag aaaaaaaaag aTGCTGTTTG CTTTCCTTAT TTTGAAGGTA CTGAAGCCAA 000560 000561 TAATTCTTTC CTGGGGTTAT GTATGAACTG AGCATTGGCT ACTGTAAAGA TATGAGATTA ATTTGTGACT CTCAAAAGAA 000640 000641 ACAAATTGTC ATAAGCTCAG ACATCTTGAG TATGTTGCCT TTCTGTATAT TCTACAGGAA TTCCTCAGTT TGCTGCTTGA 000720 000721 AGCCACTGCT TTATCAGAAA AAATAATTTA GTTGGAAGTA GGAGCATGTA GCAAATAAGA AATAAATAAA ATGAGTTGGC 000800 000801 ATTCTCCTAT TGGTTTGCAC AGCAGGCAAA ATGCAAAGTA AACCTCTATT TAATTCCCTT AGGGAATGTA GGGCCAGGGC 000880 000881 TCAGAAATAC ACTATAATTT TGTTATAAAG CCAATTAAAA GAAGAAGAAA AGCACTCATA ATGTTTATTA GTATAATATT 000960 000961 GTGTGATAAT CCAGGACTAT GCTTTTAATC CATGGGATAA CTATGAAATA GGCATTTTGA AATATGGTAA attcctatca 001040 001041 acaaacatgt tgtaaaatct gcatcta |
Predicted Small Protein
Name | NONHSAT018617_smProtein_578:745 |
Length | 56 |
Molecular weight | 6458.7634 |
Aromaticity | 0.109090909091 |
Instability index | 46.2910909091 |
Isoelectric point | 8.91375732422 |
Runs | 14 |
Runs residual | 0.10303030303 |
Runs probability | 0.0374681404093 |
Amino acid sequence | MYELSIGYCKDMRLICDSQKKQIVISSDILSMLPFCIFYRNSSVCCLKPLLYQKK |
Secondary structure | LEEEELLLHHHHHHHHHLLLLEEEEEHHHHHHLLLEEEELLLLLEEELHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiii |