NONHSAT018634
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018634 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1061 nt |
Genomic location |
chr11+:31839511..31840571 |
Exon number |
1 |
Exons |
31839511..31840571 |
Genome context |
|
Sequence |
000001 CTCAGGCAGG CGCTAACTTT CCTTAATATC CACGCCAGCG CCGTCCTCAT TGGCTGCCCG GCCCGCGTGA CGTCATGGCG 000080
000081 GCTAGAGTTG GGCACAGCTC TGCGCCGACT AGTTTTCCGG CCGGGCGGGA GCCTGCTTCT CCCCACCCAG GGTCCGGCCG 000160 000161 GCTCCAACCc ctgctttggc cttccttggc ccggcctgtg actgctctag cccggcccgg tccagcctgg GCCGCCGTCC 000240 000241 TGTATGGCGT AGAGTCGATC CCCAGGAAAC TAGTCTTGCC GAGTGCGCTC CTCCGCACCT TCGGGCACTA GGGCCCCAAG 000320 000321 ATCTCTGCCC TTAGGCTGGC CAGCTACCTC TCTGGGTAAT CACCCTGTCC CCTCCTCCGA TCCCCAAGGG AGTCCCTTCA 000400 000401 TCGGAGAGAC CCGAAGGCCG CGCCGGGATG GAGAGGCGCT TTTGGCAGGA ATCATTTTTA GGAGGAGTTC GAGGCTCGAT 000480 000481 GAGTACCCTC AACCTGGCCC TCGAGCCCGC AAGTCACTAG CTGGGCACAG ACGGGGGCTC CGGGAAGAGG ACATGCGACC 000560 000561 CCTTTTTCAG GGCCTAGGCC AAAGGTCTCT CCAGGCCTGC TGGGTTCTCA AGAGGGAAGC CCTAAAGGGG GCCTACCCGG 000640 000641 GCTTCCCTCG CCCTCTGGCT GAAAGGCTCC AACCACATTA GAAAATGTAG GTGATTGTAT TTATCTTTGA CTTTGAATTA 000720 000721 ACTGTTGACT TTGTGACTTA GAGGAGGAAA ACAGGAAAAT CCCAGATTCT GAAGTCAATA CTCATAGAAA TTGGGGCGGG 000800 000801 GTCTGCAGGA CACTGACTTG CTGGTCTGTG CCTGTTTTTC CCTCACACCT TCTGTGGACT GCGAGATGGC TTAGCGGAGC 000880 000881 TAGGCCTGGC TATCTTGGAA TGGAGATTTA GACCCTCGTT GTCATTCCCG TCCCTCATCC CTCAAAACAG GAAGCTTCTC 000960 000961 AACTCCTTCC CCTATGCTTC CATCTGGCTC TCCAATTTGA AAGTGACAGT GGTGGGGCCC GGAGGGGCAG GGGTCACTTG 001040 001041 AGGAGTTTGC GGGAGAGGAA G |
Predicted Small Protein
Name | NONHSAT018634_smProtein_74:310 |
Length | 79 |
Molecular weight | 8156.3942 |
Aromaticity | 0.0641025641026 |
Instability index | 57.4064102564 |
Isoelectric point | 11.881652832 |
Runs | 11 |
Runs residual | 0.0073483427142 |
Runs probability | 0.0387981564452 |
Amino acid sequence | MAARVGHSSAPTSFPAGREPASPHPGSGRLQPLLWPSLARPVTALARPGPAWAAVLYGVE SIPRKLVLPSALLRTFGH |
Secondary structure | LLEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLHHHHHHHLHH HLLLLLLLLHHHHHHLLL |
PRMN | - |
PiMo | - |