NONHSAT018705
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018705 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1234 nt |
Genomic location |
chr11-:33690217..33718544 |
Exon number |
3 |
Exons |
33690217..33691191,33692461..33692525,33718351..33718544 |
Genome context |
|
Sequence |
000001 caggttttgg tgagaaggag gagcacaggt ggaacagctt ttggggagac aatcagcagt tttatttggg atatgtgaag 000080
000081 tttttggtgt ctggtagacc tcctggtgga gaagctgtgt agcaggggcc catataagcc tggagttcag gagaaagcct 000160 000161 gggctggagg tacacgttgg ggagttgctg acagGCACAG CTAAAGAAAT GTGTTACTGA CAAGCCTGCA GGCCACATGG 000240 000241 CGAGATGGAA AGCAAGCAGT AAAGACCAAA GAAACTCGTT GAGGACAATG GAAGATGGGC TCAGAAGAAA ATGGATACAG 000320 000321 CTGAAGCTAG ATGGGTCATG GGTGAAAGCA GGACAGGACC TCATTCTCCA ACAGATACCA AGTAAGCCCC CAACACTGCA 000400 000401 CAGGCTGCCA CACTTGGCGA GGGAACCAGA GTCCCCAATC TCCCTGCTAC ACAAAGTCAG TAGCTGTTTT GCTTGCATTG 000480 000481 ATGGGTAGGC AGCGGCTGGT GCCTCAGTGC CGTGAGGCGA TGTCCTCTAC CCACAGCTCT GGAAGCCAAC TCACCATGCC 000560 000561 AGGGAGGGCA ACTTGCAACA TCATGGTCAC AAAGTGGCCA CCCTACCATT TCAGCAAATG TCTTCCTATG TCCATTAACT 000640 000641 AGGGGGAACT GGCTAACTCC ATACGCTTTT TAAAAGGTTA TTTACATTTA AATGAAATTC AACAGCTTTT CTACATTCAG 000720 000721 AAGCTTCTAT AAACAGAGGC TGCGGCCTGG GAAGACTGTG GTTCTACCAC TCCTGTTTCT AACAGGAATC AAGTACTATT 000800 000801 TCCTTTTGTA CCACTCAGCA GCACACACTG GACATCATTG TTGAAGAGAC AGAGATTTTC TTGTAAAAGT TGATGTATCT 000880 000881 ATTATCCCAA GAAAAAGAGA AGCTCCATTC TCAGGCCACC TTCAAAACAA GGCAAAGAAA AACCTTCACA AATAACTGTG 000960 000961 TTTCTTTTGT AGGATCCTAA AAGCTCTTAG CACCGATTCT CTTTCAGTTA GATCCTAACT TGTAGGGGAC TTTTATTTCC 001040 001041 AAAATGGCAA CACCTTTTAA AAAATCTGTC AACGCAAATC CACCATTCCC TCTCATCTTC TCTCTTTCTT GGCCTTTGTT 001120 001121 TAATTGACGA GGGAAACAAA GAATCAGGTC TATTTATAGG CACAGCCATT GGTACTGACT TTCATCCAGT TCATTTGACT 001200 001201 TTGAATATGA ACCTAAAAAA AAGGGGCTCA GGTT |
Predicted Small Protein
Name | NONHSAT018705_smProtein_236:487 |
Length | 84 |
Molecular weight | 9472.9211 |
Aromaticity | 0.0481927710843 |
Instability index | 74.5180722892 |
Isoelectric point | 9.91558837891 |
Runs | 12 |
Runs residual | 0.0045515394913 |
Runs probability | 0.0139330506978 |
Amino acid sequence | MARWKASSKDQRNSLRTMEDGLRRKWIQLKLDGSWVKAGQDLILQQIPSKPPTLHRLPHL AREPESPISLLHKVSSCFACIDG |
Secondary structure | LLLEELLLHHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHHHHHLLLLLLLLLLLLLL LLLLLLLLHHHEELLLEEEEELL |
PRMN | - |
PiMo | - |