NONHSAT018803
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT018803 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1667 nt |
Genomic location |
chr11-:35988560..35990226 |
Exon number |
1 |
Exons |
35988560..35990226 |
Genome context |
|
Sequence |
000001 GAGAAATTAA GCTTTTCCTG TTTGGAAGAA GAGACTCAGA ATGTAGGGCA AAAGAAAGCA CAGGGAAGCA GGGAGGCCCA 000080
000081 GAGCCAGATC CCAGAGAAGA GTGAAGTGCA GAATTCAGAG GCAATGCTTA CATTGCCCAG GACTCCTCTC AGTAACGTGC 000160 000161 ATGAACTCAA CACACCTCGG GAAAAAGAAA AAGAAGATCC AGATCAGATT TTGAGGACTC CAGTGTCACA CCTTCTCAAA 000240 000241 TATCCTGAGA CACCAGGCCA ACCAGGCAAC AGGAACAAGC AGCCACATGG TGCCAGCCCC TCTACTCCCA AAAGCCCGCT 000320 000321 GAGCCAGACG TTATTTCTCC AACAGCAAAG CCTCCTTCCA GAGGCTCTAA GCATTTGATG CTCACATCCA CTCCTCCCAA 000400 000401 GGATGAGATG ACCTCACTGG CTCTGGTCAA TACTAATCCC TTCACCCCAA AGTCCTATAG AAAATTATTC CTTCAATCCA 000480 000481 GTGTCAAGAG GAAAATTCGA GATGATCTTG AGGAAGCTGG TCCAGAGGAA GGCAAGGAAG AACAAGGGCT GCCTGCTGAG 000560 000561 ACATGTGTTC TATGAGAAAC CAACATGGCT TCCTACTATA AAAAAGAATG CTCGGAGGTA GAAAAAATTG GGGTTGGTGA 000640 000641 ATTTGGTACA GTCTACAAGT GCATTAAAAG CCTGGATAGA AGTGTTTATG CAATAAAGCA CTATATGAAA ACTTTTTCAG 000720 000721 GATTTCACCT GAGAATTTGG CTTTGCGTGA AGTTTATGCT CATACAGTGT TTGGACATCA CCCCACCTGG TACATTACTA 000800 000801 CCCCTTACAG GCAGAAGATA ACCATATGAT CATTCAGAAT GGATACTGCA ATGGCAGGAG CTTGCAGGCT GCTATATCTG 000880 000881 AAAACACTAA GTCTACTAAT CACTTCCAAG AGCCAAAACT CAAGGACATC CTTCTACAGA TTTCCCTTGA ACTTAAATAC 000960 000961 AGCCACAACT CTGGCATGGT GCACCCGGAC ATGAAACCTT GTAAAACCTT CCTTTGTCAC AAGATGCAAA GTGACTCCTC 001040 001041 TGGAGTCACA GAAGTTGAAA ATGAAGCTGA TTAGTTTCTC TCTGCCCATG TGATATATAA AATTGGTGAC CTAGGCCATG 001120 001121 TGACATCAAT AAGCAAACTC AAAGTGGAAA AAGCAGATAG TTGCTGCCTA GCAAATGAGA TTTTGCAAGA GGATTATTAG 001200 001201 TACCTTCCCA AAGCAGACCT ATTTGCCTTG GGATTAATCA CTGCAATGGC TGAAGGAGTA AGGACATTAC CCATCAACAG 001280 001281 TGCTGCAAGG CACCATAACC ATGAGAGTAA CTTCCCAGAC ATTCCTCAGG AGCTCTCAGA AGACTTTTAC AGTCTGCTCA 001360 001361 AGCACATGAT CCACCCTGAT CCAGGAGAGA GACCTTCTGC AGCAGCTCTG GTCAGAAATT GGCCCTGGCC CTCCCTGGGG 001440 001441 AAAGCAGAAG AGCTCTAGCA GCAGCTGAAT TTGGAAAAGT CCAAGACAGC TGCACTGGAA AGGGAACTAA GGGAAGCCCA 001520 001521 GCAGGCCCAG TCCCTGCAGG GAGACTTCCA TCATGGTGAC CCTCGGGTCT TTGGGACCAC ACGGGATCAG AAAACACCAA 001600 001601 ATGCCTGGTA GGAGGAAAGA GTGCAAGGTC TTCAAGCTTT ACCTCAGGAC AGCATGAGCC TCTGAAC |
Predicted Small Protein
Name | NONHSAT018803_smProtein_584:820 |
Length | 79 |
Molecular weight | 9010.6824 |
Aromaticity | 0.128205128205 |
Instability index | 47.6705128205 |
Isoelectric point | 9.32720947266 |
Runs | 15 |
Runs residual | 0.0586303939962 |
Runs probability | 0.0470117176 |
Amino acid sequence | MASYYKKECSEVEKIGVGEFGTVYKCIKSLDRSVYAIKHYMKTFSGFHLRIWLCVKFMLI QCLDITPPGTLLPLTGRR |
Secondary structure | LLLLEELLLLEEEEEEELEELEEHHHHHHHLLLHHHHHHHHHHHLLLLLEEHHHHHHHHH HHHLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHH HHHLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTT TTTooooooooooooooo |