NONHSAT021269
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021269 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
901 nt |
Genomic location |
chr11-:47726652..47732011 |
Exon number |
2 |
Exons |
47726652..47727469,47731929..47732011 |
Genome context |
|
Sequence |
000001 TAACCCTCAA TGCCTGTTGA ATGGCTCTCT TGGGGAAAAA GATGATTTGA TACCAGACAC CCTGCAAAAG GAGAAGCTTC 000080
000081 TATGGCCTAT CAGTTTATCT TCAGCTGTGC ACAGACAGAT AGAAGCCATC AACAGAGGTA TTTCATGTCC TTCCAGACCA 000160 000161 GAAGATTCAA GCTCCTTTTT TGGACTATGT CTTCATCACC TGCTGTTCCC ACCAGACCTA AGAATTACCA GACAGGAATG 000240 000241 GGATTCATGC CTGATGAGCA CTGAAGGACC CTCAGCCTTT AGTTCCCCCT TTCATTTCCA tttttttctt ttttcctcat 000320 000321 tccctttctt ctttttcttt ttcttttttt tttttttttg acacagactt tcactcttgc ctgggctgga tgcagtggcg 000400 000401 cggcctcagc tcactgcaac ctccacctcc cagattcaag gattctcctg cctcagcttt ccgagtagct gggattacag 000480 000481 gcatgtgcca ccacgcccag ctaattttta tgtttttagt agagacagga tttcaccacg ttggccaggc tggtctcgaa 000560 000561 ctcctgaact cagatgatca gcccgcctca gcctcccaaa gttctgggat tacaggcttg agccaccacg cctggcccct 000640 000641 cctttctttt ttatcttcct gaaagccttt cttttcttcc cttttttctc attctttctt tcccaagagc tcttcctctc 000720 000721 ttctgcccca tctcatgcct tctctcccct tcctctttcc atcttctttg ttttatgtct gtctttcctt TGTATGGTTA 000800 000801 TATTATGGCC CTGAAATTTT ATTTATAGAT TATTTCACTA TAGTTGATAA AAAAGAAGAA AAAAAGAATA AAGTTTTATG 000880 000881 TAATTTTTTC TAAAATGCTA A |
Predicted Small Protein
Name | NONHSAT021269_smProtein_389:661 |
Length | 91 |
Molecular weight | 9697.898 |
Aromaticity | 0.0888888888889 |
Instability index | 42.6288888889 |
Isoelectric point | 6.56170654297 |
Runs | 9 |
Runs residual | 0.0398589065256 |
Runs probability | 0.016820742311 |
Amino acid sequence | MQWRGLSSLQPPPPRFKDSPASAFRVAGITGMCHHAQLIFMFLVETGFHHVGQAGLELLN SDDQPASASQSSGITGLSHHAWPLLSFLSS |
Secondary structure | LLEEELLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHHHL LLLLLLLLLLLLLLLLLLHHHHHHHHHHLL |
PRMN | - |
PiMo | - |