NONHSAT021324
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021324 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1088 nt |
Genomic location |
chr11-:49938943..49940030 |
Exon number |
1 |
Exons |
49938943..49940030 |
Genome context |
|
Sequence |
000001 AATTAAAATA CAGATGATAC AAAATTAAAC ATACATATTT AAGCCATCAT CTTTTTTCAA AACACGTTGT GTGTGCCTCC 000080
000081 TGGCAGTTGG TGAAATTTCT GATGTATTCA ACAACATTGA TCTCCACTTT GTCTCTGCAT GTTCTCCTTT TATTTTAATT 000160 000161 TGTACCATTT TTTTCCCAAA TAAAAGTACT TGCACTCACT TAGAGATGCT GAAATAAATT GATTGGTATA AAGTAAGGTA 000240 000241 TCTGATTAAC CAAATTTACA CTAAAGCCAA TTGGCCTTTT CATGGATTAT AACACTATGC ACAACCACTC CATACTCAAA 000320 000321 CATGCATTTC TTTCTCCAAT GTTATATGAT GCAGCACCTA GCTCTTTACA GGACATTTTT TTCTTGGTGG GTCACAGATT 000400 000401 TTCCTTCTGT TGGTGATGGC CTAGGCCACT ATAGGGCCAT CTGCAAGTCC TTGCAGTATT TGGTTGTCAT GAAGCAATGG 000480 000481 CTGTGTGTTG TGCTGCTGGT GGTGTCCTGG GCTGGAGGAT TTTTGCACAT AGTAATTCAA CTTGGACTTA TTTATGGGCT 000560 000561 CCCATCTTAT GACCCCAATG TCATTGGTCA TTTTATTTGT GACATGGACC CCTTAATGAA GCTTGTCTGT GACTACACAC 000640 000641 TCAACAGATT TGCCTATTTT GCAGGTCATG ATTAAATACT AGGTTTTATG TATTTCACTT ATGCTCAGAC TGGACTGTTT 000720 000721 CCTTTTGGTG ATTCGACCTC ATTATTCTTT TGTCATTTTT TCCCTAGAGG ACTTGGTTCT ATAAATCTTG CTATACATAG 000800 000801 TTATTATCCC TGTGGCATCT CTAGAGATAC GGAGCCTACC ATCAGAATTA TGATAAAGGT CCCAATGAAT TTAATTAGAG 000880 000881 AAGAATCACC TTTGGAGATG CACCAGTTGA ATGACTCAAC AATATGTGTT GCAGTTCAAA TGTGGATAAA GTATCCACAG 000960 000961 ACTTCTGCCC TTACTTCAAA GAGTATTTGT TTATAACAGT ATTCACATGA CTGATTTTTA GGAATTAAAA TGATAGACTC 001040 001041 AAAACATGAT AAAATACGGA TTAAAATTAT TCTCCATCCT TCAGATTA |
Predicted Small Protein
Name | NONHSAT021324_smProtein_281:415 |
Length | 45 |
Molecular weight | 5189.9233 |
Aromaticity | 0.181818181818 |
Instability index | 70.7159090909 |
Isoelectric point | 6.36163330078 |
Runs | 9 |
Runs residual | 0.0414438502674 |
Runs probability | 0.0479106557538 |
Amino acid sequence | MDYNTMHNHSILKHAFLSPMLYDAAPSSLQDIFFLVGHRFSFCW |
Secondary structure | LLLLLLLLHHHHHHHHLLLHHHLLLLLHHHHHHHHHLLLEEEEL |
PRMN | - |
PiMo | - |