NONHSAT021568
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021568 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
772 nt |
Genomic location |
chr11+:60139785..60211198 |
Exon number |
6 |
Exons |
60139785..60139901,60145070..60145167,60152338..60152457,60173217..60173359,60184771..60184824,60210959..60211198 |
Genome context |
|
Sequence |
000001 ATTTATTGGA GCTTCCAAGA GTCTTTACAA GAATGGCAAG AATGTTGCAG GGGCCCAGGG CCGGGCACGG TGGCTCATGC 000080
000081 CTGTAATCCA GCACTTTGGG AGGCTGAGGC GGACGTAATT CCTGCCTCTT CCACAGACTA GACATGTGAC TGGGGGCAGA 000160 000161 TTCCTTCAGC AATATCACCT CATTTGGAGA AGAACTGGAC TAAAATACCC TCCAATCACT TTCCGATTTG CTGGTTTAAT 000240 000241 AATCCTATCA GAAAAGAAGA GGTTAGCTAT ACATGACTTT CTCTAGAAGC ATATCGATTG GCTCCTTGTA ACATTTTTCC 000320 000321 TCTTTAATAT AACAAAATTG TGCAGTGTCT GATGGCTACA GAACCATCCA AAATATGGGT TTCCCATACT TGGTGATAGA 000400 000401 GTGTAAGGGG TTCTCAGCTT ATATATTTAA AATAACAGCT CTCATTTCAA ATACCATTTA TTTCTCCTCA TTATTTGCAG 000480 000481 AAGACGTGAA GGCAGATTTT CATTCTTCTT CTGGCCAAAG CTCAGTACAA GAACGACCTC AAAGGCAAGT ATTGGGAAGG 000560 000561 AAAATAGACT AAAAAGTAAA TTATCTAAAT ATTCATACCA AGAAATTAGA TTAAAAAATT AAATTTAAAG AAAATGAAAG 000640 000641 AATTGAGATA TAGTATTCTA TAATAGACAT AACAAAGAAT AGAGATAAAA ACTAATGAAA TACAACACAA ACCATGGATA 000720 000721 AGATAAAATA AAGCTAAAAT ATGGATGTTT GAAAAACTAA TAAAATTGGT AA |
Predicted Small Protein
Name | NONHSAT021568_smProtein_374:571 |
Length | 66 |
Molecular weight | 7323.2765 |
Aromaticity | 0.138461538462 |
Instability index | 48.1507692308 |
Isoelectric point | 7.89385986328 |
Runs | 13 |
Runs residual | 0.0497115384615 |
Runs probability | 0.0661000366883 |
Amino acid sequence | MGFPYLVIECKGFSAYIFKITALISNTIYFSSLFAEDVKADFHSSSGQSSVQERPQRQVL GRKID |
Secondary structure | LLLLEEEEELLLLEEEHHHHHHHHHLLEEEEHHHHHHHHHLLLLLLLLLLLEELLHHHHH LLLLL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLL |
PiMo | oooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiii |