NONHSAT021606
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021606 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
724 nt |
Genomic location |
chr11+:60690090..60690915 |
Exon number |
2 |
Exons |
60690090..60690113,60690216..60690915 |
Genome context |
|
Sequence |
000001 ACCCTGTACT CCCACCAAAC CATGGCCTGT GGGGGCTGCA GGGGAGGAGG ATGTACCTTG TGTCTCTTTC AAGTGCCTTA 000080
000081 ATCCGAGCCA GCAGGGCCTT CTGCTTGCCT GCTGCCATAC TGTATGTAGG AAAGTGTTCT GTGGCTGCTT TGTGTCAAGA 000160 000161 AAAGAGCAGT CACTCTCAGA ATCTTGATTC CCCATCAGCC AAAGCAAAAG ATGGCTGCTG CTTTGTAGGC ATGTGCCTGC 000240 000241 AAGTGGGACC TTGCTGGGCA TTATATGCCC TGTGGGGGTT TCAGAGACCC TGAAAGAGGA GGGAGGACCC GCCTCCTTGT 000320 000321 CTGCACAACT GCATGCACTT CTCTCCCCAT CGCTCCACAA CCTGAAACCG AGAAGGAGTT GCTGACCAGT GCCCACCCCG 000400 000401 GCAGCCCGGG AGGAACACAG GCAGCTCCTT TCCCTTCACG TGGTCTGCAG AGAGCAGGGT GAGCTGCCAG CTGCCCCTCT 000480 000481 CCACCAGGGT ACCCTGTCTT GGTGGTTAGG GGCCACTTTT CCTTTGAGGC TCTAGTGGAG GTGGATGTCC TTCTCTGCCA 000560 000561 GGCTTGGCAC ATGATGTGAA GAATAAATGC CCAATTCTTA CTGTTCAGGT TTGATGTGGA ATCACAGCTG CAGTGATATA 000640 000641 TATTTTTTAT CAGTGCTTGG TTGGTTTTAA ATAAAGTGCA CGCTATTTTA TTATCTTGTT CTGAATAAAA TGTATTTACT 000720 000721 CCAA |
Predicted Small Protein
Name | NONHSAT021606_smProtein_50:292 |
Length | 81 |
Molecular weight | 8590.0556 |
Aromaticity | 0.1 |
Instability index | 52.3325 |
Isoelectric point | 8.77703857422 |
Runs | 14 |
Runs residual | 0.0361842105263 |
Runs probability | 0.035764756353 |
Amino acid sequence | MYLVSLSSALIRASRAFCLPAAILYVGKCSVAALCQEKSSHSQNLDSPSAKAKDGCCFVG MCLQVGPCWALYALWGFQRP |
Secondary structure | LEEHHHHHHHHHHHHHLLLHHHHHHLLLLLHHHHHHHLLLLLLLLLLLLLLLLLLLEEEL LEELLLHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |