NONHSAT021662
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021662 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1299 nt |
Genomic location |
chr11+:61138743..61140115 |
Exon number |
2 |
Exons |
61138743..61139561,61139636..61140115 |
Genome context |
|
Sequence |
000001 gatctgcccc cctcggcctc ccaaagtgct gggattacag gactgagcca ccattcccag ccccaaatga atttctgtta 000080
000081 cttcacagcc ttttgtcaaa gcattatgcc ttaggccgac cccacacccc cagggaaagg aaaaaagcct caggcatcct 000160 000161 tagatgactg ccctcagaaa ttgttctgtg ctggctttga accctttcaa gatgtcctat aaaacaagga catgccaatt 000240 000241 cttacttcag gtctgcctgc aatctaagtc tagctcctaa agtaagagtt tgttagattt cacactgatg atgCTTGtat 000320 000321 tgatgaaaaa gaaagccgaa ctctaaaata cttgaagaga tgtattattc tgagccaatg tgaggacaat aatccatgac 000400 000401 aaagccccag gaggtcctga gaacacgtgc ccaagatggt tgggttacag cttgatttta tgtattttag ggggacagaa 000480 000481 gttacaatca gagacataaa tcaatagacg caaggtgtac attgattttg cccagaaagg caggacatct caaaagggga 000560 000561 agccttgcaa gtcaggtgga tttaaagatt tctgattggc aactggttga aagggttaaa tttgggccgg gcacagtggc 000640 000641 tcacacctgt aatcccagca ctttgggagg tcgaggtggg gtggatcacg aggtcaagag ttcaggacca gcctggccaa 000720 000721 cgtggtgaaa ccctgtctct gctaagaata caaaaattag gcaggtgtgg tggcacatgc gtgtaatccc agctactcag 000800 000801 gaggctgagg caggagaata gactctgtct cagaaaaaaa aaaaaaaaaa gttaaattct gcctaaagaa ttgaagtatt 000880 000881 caattctacc taaagtgttg aagtccacag aaatgtttgc agttaagatc atgagagggt atagaaggca aggttcttgG 000960 000961 ttttgttttg tttttgagat ggagtctcac tctgtctccc aggctggagt gcaatggcat gatctcagct cactgcaacc 001040 001041 tctgcctctt gggtttaaat gattctcctg cctcagcctc ctgagttgct gggattgcag gcgtgcacca ccgtgcccag 001120 001121 cCGGAAAACA TTCTTTCTCA AAAAAAAAAA AAAAAAAgct gggtgcggtg gctcacgcct gtaatcccag cactttggga 001200 001201 ggcgaaggcg gggggatcgt gaagtcagga gatcgagacc atcctggcta acatggtgaa accccgtctg tactaaaaaa 001280 001281 aatacaaaaa aattaggca |
Predicted Small Protein
Name | NONHSAT021662_smProtein_1058:1183 |
Length | 42 |
Molecular weight | 4485.4745 |
Aromaticity | 0.0487804878049 |
Instability index | 86.8414634146 |
Isoelectric point | 10.4059448242 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0348682015348 |
Amino acid sequence | MILLPQPPELLGLQACTTVPSRKTFFLKKKKKKAGCGGSRL |
Secondary structure | LEELLLLHHHLLLLEELLLLLLLHHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |