NONHSAT021662

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT021662

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1299 nt

Genomic location

chr11+:61138743..61140115

Exon number

2

Exons

61138743..61139561,61139636..61140115

Genome context

Sequence
000001 gatctgcccc cctcggcctc ccaaagtgct gggattacag gactgagcca ccattcccag ccccaaatga atttctgtta 000080
000081 cttcacagcc ttttgtcaaa gcattatgcc ttaggccgac cccacacccc cagggaaagg aaaaaagcct caggcatcct 000160
000161 tagatgactg ccctcagaaa ttgttctgtg ctggctttga accctttcaa gatgtcctat aaaacaagga catgccaatt 000240
000241 cttacttcag gtctgcctgc aatctaagtc tagctcctaa agtaagagtt tgttagattt cacactgatg atgCTTGtat 000320
000321 tgatgaaaaa gaaagccgaa ctctaaaata cttgaagaga tgtattattc tgagccaatg tgaggacaat aatccatgac 000400
000401 aaagccccag gaggtcctga gaacacgtgc ccaagatggt tgggttacag cttgatttta tgtattttag ggggacagaa 000480
000481 gttacaatca gagacataaa tcaatagacg caaggtgtac attgattttg cccagaaagg caggacatct caaaagggga 000560
000561 agccttgcaa gtcaggtgga tttaaagatt tctgattggc aactggttga aagggttaaa tttgggccgg gcacagtggc 000640
000641 tcacacctgt aatcccagca ctttgggagg tcgaggtggg gtggatcacg aggtcaagag ttcaggacca gcctggccaa 000720
000721 cgtggtgaaa ccctgtctct gctaagaata caaaaattag gcaggtgtgg tggcacatgc gtgtaatccc agctactcag 000800
000801 gaggctgagg caggagaata gactctgtct cagaaaaaaa aaaaaaaaaa gttaaattct gcctaaagaa ttgaagtatt 000880
000881 caattctacc taaagtgttg aagtccacag aaatgtttgc agttaagatc atgagagggt atagaaggca aggttcttgG 000960
000961 ttttgttttg tttttgagat ggagtctcac tctgtctccc aggctggagt gcaatggcat gatctcagct cactgcaacc 001040
001041 tctgcctctt gggtttaaat gattctcctg cctcagcctc ctgagttgct gggattgcag gcgtgcacca ccgtgcccag 001120
001121 cCGGAAAACA TTCTTTCTCA AAAAAAAAAA AAAAAAAgct gggtgcggtg gctcacgcct gtaatcccag cactttggga 001200
001201 ggcgaaggcg gggggatcgt gaagtcagga gatcgagacc atcctggcta acatggtgaa accccgtctg tactaaaaaa 001280
001281 aatacaaaaa aattaggca
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Predicted Small Protein

Name NONHSAT021662_smProtein_1058:1183
Length 42
Molecular weight 4485.4745
Aromaticity 0.0487804878049
Instability index 86.8414634146
Isoelectric point 10.4059448242
Runs 9
Runs residual 0.0435433188688
Runs probability 0.0348682015348
Amino acid sequence MILLPQPPELLGLQACTTVPSRKTFFLKKKKKKAGCGGSRL
Secondary structure LEELLLLHHHLLLLEELLLLLLLHHHHHHLLLLLLLLLLLL
PRMN -
PiMo -