NONHSAT021754
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021754 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
8163 nt |
Genomic location |
chr11+:62283391..62300355 |
Exon number |
2 |
Exons |
62283391..62289618,62298421..62300355 |
Genome context |
|
Sequence |
000001 CTTTATTTGC CTTGTACAGC ATCAATTTTC TTACATTCTC AGTTAATTGG CCATTAAAGT GCTGGAAATT TTCTTAATCA 000080
000081 TGATAACATT TGTTAAAAAG AAATCAGAAC TAATATCAGG AACATGGCGG CATGAAGGAA ACAGTTCCCT TACAAAACAC 000160 000161 AGAAAATGGA AGCCCCTCAT GTTGAGGGGG TGGGTTGGAC AATTTGCAAA CAGATTCTAA TTTCCTCTCA CCGTCAGCAC 000240 000241 CAAACTGGCT GGGACCACCA CCCCTGGGTG AAAGAAACAA CACTAAAGAA CCCTAAAAAC ACCCACACAC CCTGACTACC 000320 000321 ACCACCTCTG GGCCATCTGT GGGCGTTTGC TGTTTGAACA GATCCAGTCT CAGGAAAGAG GAAGACCTGA CCTCCGTCTG 000400 000401 CAACCCATCA CCCCACCCAC CCTTACTAAC AAAAGCCCCC AAAGTCATTA CAATGAAAAA GTGGGTTTCC ATTACCCCAA 000480 000481 AACTAACAAT GTTCAGTAAA AATGAGGATA ATAAACACAA AAGCTTGCTT AGTAAACAGG AGCTCTCAGC AGTCAATGCA 000560 000561 AAAAAATATA TATATATGAA ATCTTAAGGC AAATACTGTT GACTTTGCAC ATGGGCTGGA CGAACTTGGA ACTCTTTACC 000640 000641 TATCTGTATA GTTCCAGGAG CCTACAGGCG GTCGGTTTTT CAGCGCTTGC CACCGGGCCA GGCAAGGTCT TTGCATGATT 000720 000721 GCTGAGGCAG TCGGTGTGTT TCCCTTTGGA GTTTATATAG GAACACACCA CCCAAGGCTG ATGTTTTGTT ATATATATAT 000800 000801 ATATGTACAC ACATACAAAG GCCTGCTACT CTTTCTTTGT GGAAACTGAC AGCTCCACCT CGGGAAGCTG GATGCCAACC 000880 000881 TTATTCCCAC TGTCATTGCT AGAAGAGGAG GACAGTCGGG ACTTCTTAGA GGCCAGGGAC ACCCCACTCC CCTGTAACTT 000960 000961 GCCTGTCTCA TCATCGCTCC CAGTCACCTC ATAATGACCT TTGCTCTTTG ACCCCAATCC ACCAAAGGTA CCGAATTTCA 001040 001041 GCTTCCCGTG TTTCCCTTTA ACTTTCCCAC CTTCCAGAGA CACTTCCCCA CCTTCAAACT CCAGCGTCCC CGTCGGGGTG 001120 001121 GAAGGTCCAG AGAACTCTCT TTCATCACTG AATGAATTTG AGCGGTGCCG TGGCTTCTTA CTTTTAAATA AGGAGAATTT 001200 001201 GCCTTTCGGT GAAGAGGCTT CGGCCTCTGC CTCTCCTTCC AGAGAGCCCA GGCTGGCCTT TGAACTTTTC AGGTCACCTT 001280 001281 TGGACCCAGA AATTGATGCT TCTGGTGAGC CAGTGACACC ACCTTTCCCT TTAGGTTTGG AAAAATTAAA CTTGGGCATT 001360 001361 TTGATCTTGG ACTTTTTCAG TTTGACTTCA GACTCTTCCC ACTCGCCGTC TCCAGCACCA GCTTGGATGC TGGCCTCTGC 001440 001441 TTTAGGGAAG TGAACATCCA CCCCCATTTC TCTGCCAACC AGCTCACGGC CAGAGAAGGT AAATTTGGGG ATCTTCATTT 001520 001521 TAGGGAATGT TACTTTTCCA GATCCACTTT CCAAGTGACC TTGAGGCCCA GACACACTCA GCCCAGGAGC CTGGAGTCCA 001600 001601 ATCTGACCTC CTTTCACACC TCCTTCCACC TTTGGTCCTG AGAAATGAAG GCCCCCAGCA AACTTAGATG TGTCCAAGTT 001680 001681 GAGAGCAGAG GAGACTTGGG GTCCCTTCCA CTCACCCCCG GAACCTTTAA CACTCAAATG CCCTTCACCA AGGCTGATGT 001760 001761 CTGGGGCACT GACACCCCCT GAAACATCCG CACCTCCTTT GATTTTTGGG CCCTTCAAGT TGATGCCAAA ATCTGACTCA 001840 001841 GGAGATGCCA TATTAAAGGC AGGCCCCTTC ACACTGATAT CAGGAGCAGC CCCATGGAAA CCTACTTCTG AACCTTTCAG 001920 001921 ACCACCTTTG ATTTCAGGCC CAGAAATCTG CCCAGTTGGG AGTTTCACAT TCACGCCTGG CAGGTTCACA TCACATCCAG 002000 002001 AGGACTTAAT TCCAGGCATC TGGAGGTTTC CTTCTAGGCC TTGAACACCA ATGCCTGGAA GACCTCCTCC GACAGTGGGG 002080 002081 CCTTTGATCT CACCAGTGGC CCCAAGGCTC CCTTTCACTT TTGGTCCTTC CAAGTTAAAG TCCACATTCG GTGCTGAAAT 002160 002161 CCGAGGCCCT TTCAGGTTCA CATCCACACC TGGCCCCTTC AGTTCGCCAG AAACCTGTGG CCCCTTGGCA TTGACGTGCA 002240 002241 AGTCGGACCC CGGAGTAGAG ATGCCAAATT GGGGCAGCTT CATTTTGGGA AGTTTAATGC TGCCTTCGGA TGCCTCCAAG 002320 002321 CTTAGATCAG GAGCTCCTAC GGATACTTTA GGGCATTTGA TGTCACCAGA GACAGCCAGA TCTCCCTGCA GGCTTGGTCC 002400 002401 CCTCAGTGTC ACATCTGGTG CCCCAACGTT AAGCTTTGTT GTGGCATCGA TCCCTGGCAC TTTCACACCG TCTCCTCCCA 002480 002481 CCTGCATTTT GCCACCGACA CCACTGAGGT TGAGCCCTGG AGCATGCACC TTCATGCTGG GAACAGATGC ATCCAGGTCT 002560 002561 CCCTTCAAAC TTGGTCCTTT CAAGTTCAGA TCAAGGTCAG GCCCAGAGAC TTTTGGCATA GAGAGGTTCA CTGAAGGCAA 002640 002641 GTCTACTCCT GGCCCCTTTA GAGAAACATC GGGCCCTTCG AGCTTAACAT CTGGTCCTCT CAAGTCTCCT TCAAGAGAGG 002720 002721 GTAGCTGGGC ATGGACCTCG GCTCCCCCAC CCTCCATTTT CACACCTGGG ATGCCGATCT TGGGCATGGA AAACTTGGGG 002800 002801 AACTTAATTT TTGCTTCTGG ACCTTGCAGA TCTACATCTG GTCCTTCCAG TCCCACGCTG GGGACATCAC CCTTTATCTT 002880 002881 TGGTCCTTTC AAGTTTACAT TCACATCAGG GATGGAGACT TGAGGGGCAG AAATGCCGAA GGACGGTGTT TTGACTTTAG 002960 002961 CATCTAGGCC TTCGATGTTG ATGTCAGGTG CACCCAAGTT TGCCTGCACT TTGGGGCCTT TCAGGTCACC CTCTATTTTT 003040 003041 GGCACTGAGA TGTCCACATC TGGCATCTTG ACCTTGGGAG CCTTCGCCTT GATGTCAAGA CCTTCGACGT GAATCGCTGG 003120 003121 CAAAGAAAGT TCCAGATCAG GTGCCTGGAG TTCACCCTCC AGTTTGGGGC TAGGGAGAGG GGCCTCAGCT TTAAATTTAG 003200 003201 GTGATTTAAT GTCAAACTCT ACATCTGGGA AGTACATTTT TCCAAACATC GTTTTCTTGG TTTTGGGCGA TTTCACGTCG 003280 003281 ACTTTGAGTG CAGCATCCGG CCCTGCGATG TTGACATCTA CATCCGGAGC CTTGAGGCTG GCATCAATTT CACCCCCAGG 003360 003361 AACATTCAGG TCAAATCCCT GTTTTTTGGC CTTAATCTTA GGACCACTCA TATGAATTTT AGGCATTTTA AACTTACTTT 003440 003441 TCTTGCCCTT GCCACCAACA CTAATTTCAG GAGTCTCAAG GTTCAGCTCT GCCTCAGGAA CAGTGACATC CAGTGAAGGT 003520 003521 GACTTGATGT CAGCTTTGGG GCTTTTTGCC CCAAATCCAA ACTTGGGTTT CTTAAATTTG GGGATTTTAA CATCTGGCCC 003600 003601 TTCGATGTTA ATATCTGGGC TGTCCATGTG TACATCTAAG CTTGGAGCTT CAACTTTGGG TCCCTTGAGG TCCACTTCAC 003680 003681 CACCTTCTAA CTTCGGACCT GAAAATCCAA TTTTTGGTGC CTTGAGATGC AAATCAACAT CAGGAGCAGT TACTTTAGGA 003760 003761 GCAGATATCT CCAGCGATGG CATCTTCAAA GATGGGCCAC TGAGTTTGGC ATCAGGGCCT TCGAAATCCA GACGTGGACC 003840 003841 TTTAAGATCT ACTTCTGGGC CTTTCAAAGT CCCTTCAACC TTAGGGACAG ACACATCAAA ATCTCCTTTT ACTTTGGGTC 003920 003921 CTTTCAAATC CAGGTCAACA TCAGGTATGG AGATCTTGGG AGCTTTGATA TTTATTTCAG GCATCTTGAA CTTGGGGCCC 004000 004001 TTCAGTTTTG CGTCTGGACC TTCGATATTC ACATCTGGAA TATCAACGTC CACCTTGGGT CCCGAGACAT CGATGTCGGC 004080 004081 CTTGGGCAGG CTCACATCCA CATCTGGACC TTCTCCTTTG AAGCCAGGCA TGCTGAATTT GGGCATTTTC ACCTTGGGCA 004160 004161 TCTTCAGGTG CCAGTCTGGG CCATGAACAT CCACATCAGG GGTGTTGATG TCCACTTTTG GGCCCTTGAT GTCAGCTTCT 004240 004241 GGGCCCTTGA GGTCACCTTC CACTTTAGGA AGGGTAACAT CCACATCGCC CTTCACTTTG GGTCCTTTCA GGTTTAAGTC 004320 004321 AATATCAGGC ATGGAGATCT TGGGGGCTTT GATGCTCATC TCAGGCATCT TGAACTTGGG GCCCTTTAGT TTCGCATCTG 004400 004401 GACCTTCGAT ATTCACATCA GGAACATCAA CGTCCACTTT GGGTCCTGAG ACATCAATGT CAGCCTTGGG CAGGTTCACA 004480 004481 TCCACATCTG GGCCCTCTCC TTTGAAGCCA GGCATGCTGA ACTTGGGCAT TTTCACTTTG GGCATTTTTA GGTGCCAGTC 004560 004561 TGGGCCTTGA ACGTCCACAT CTGGGACATC AATGTCCACT TTGGGGTCCC TGATGTCAAC TTCGGGGCCC TTGAGGTCGC 004640 004641 CTTCCACTTT GGGCAGAGAA ATGTCCATGT CGCCCTTCAC CTTTGGACCT TTCAGATTCA GGTCAACTTC AGGCATAGAG 004720 004721 ATCTTCGGTG CCTTGAGGTG TAAGTCAGGC ATTTTAAATT TGGGGCCCTT CAGTTTCCCT TCTGGACCAT GAATGTCAAT 004800 004801 ATCAGGAGTG TCAATGCCCA CTTTAGGGCC TTTGACATCC ACTTTGGGAC CTTTCAGATC TCCCTCCAGT TTAGGAACGG 004880 004881 AAATGTCCAT ATCTCCTTTT ATCTTAGGTC CTTTCAAATT CAAATCAATG TCACTCATGG AGATTTGTGG GCTTTTGAAA 004960 004961 TGTACATCAG GCATCTTAAA CTTGGGACCT TTGAGCTTCC CTTCAGGACC TTCAATGTCT ACCTCTGGCC CTTTCAGATC 005040 005041 ACTTTCCACC TTAGGTAGTG AAACATCCAC ATCACCCTTC ACCTTGGGAC CTTTCAGGTG CAAATCAAAG TCAGGCATAG 005120 005121 AGATTTTGGG AGCTTTGATG TTCATCTCAG GCATCTTAAA TTTGGGCCCC TTCAATTTTC CTTCCGGACC TTCAATATTG 005200 005201 ACATCAGGTG TGTCAATGTC CAAACTGGGG CCTTTTATGT CAATTTCAGG GCCCTTGAGA TCACCTTCCA CTTTGGGCAG 005280 005281 AGAGACATCC ACATCACCTT TCACTTTGGG ACCCTTCAAG TTAAAGTCAA TGTCAGGCAT GGAGATTTTG GGGGCCTTGA 005360 005361 TGTTCATCTC TGGCATCTTG AACTTTGGAC CCTTGAGTTT TGCATCTGGA CCTTCGATAC TGACATCAGG GGCATCAATG 005440 005441 TCCACTTTGG GGCCAGAAAT CTCAATGTCA GCCTTAGGAA GGGTAACATC CACATCTGGG CCCTCTCCTT TGAATCCTGG 005520 005521 CATGCTGAAT TTGGGCATTT TCACCTTGGG CATCTTCAGG TGCCAGTCTG GGCCATGAAC ATCTACATCA GGGGCATCGA 005600 005601 TGTCCACTTT GGGGCCCTTG ATGTCAACTT CTGGGCCCTT GAGGTCACCT TCCACTTTAG GAAGGGAAAC ATCCACATCA 005680 005681 CCCTTCACCT TGGGACCTTT CAGATGCAAA TCAAAGTCAG GCATGGAGAT CTTGGGGGCT TTGATGTTCA TCTCAGGCAT 005760 005761 CTTGAATTTA GGGCCCTTTA GTTTCGCATC TGGACCTTCG ATATTCACAT CAGGAACATC AATGTCCACC TTGGGTCCTG 005840 005841 AGACGTCAAG GTCAGCCTTG GGCAGGTTCA CATCCACATC TGGGCCCTCT CCTTTGAAGC CAGGCATGCT GAACTTGGGC 005920 005921 ATTTTCACTT TGGGCATTTT TAAGTGCCAG TCTGGGCCTT GAACGTCCAC ATCTGGGACA TCAATGTCCA CTTTGGGGCC 006000 006001 CTTGATGTCA ACTTCAGGGC CCTTGAGGTC GCCTTCCACT TTGGGCAGAG AAACGTCCAC GTCGCCCTTC ATCTTTGGAC 006080 006081 CTTTCAGATT CAGGTCAACT TCAGGCATAG AGATCTTCGG TGCCTTGAGG TGCAGGTCAG GCATTTTAAA TTTGGGGCCC 006160 006161 TTCAGTTTCC CTTCTGGACC ATGAATATCA ATATCAGGAG TGTCAATGTC CACTTTGGGT CCTGAGACAA CAACGTCAGC 006240 006241 CTTAGGCAAG TTCACATCCA CTTCTGGGCC CTCGCCTTTG AGGCTGGGCA TGCTGAACTT GGGCATTTTC ATCTTGGGTA 006320 006321 TTTTCAGGCT CCAGTCCAGG CCTTGGCCTT CCACATCTGG TGCTTTAATA TCTACCTTGG GACCTCTGAT GTCCACATCT 006400 006401 GGAACCTGCA TTTCACCCTC TATCTTTGGT GCAGAGATAT CTACATTTCC TTTCATTTTG GGTCCTTTAA GATCCAGGTC 006480 006481 AACATCTGGC AAAGACATCT TAGGAGCTCT GAAGTGCATC TCAGGCATCT TAAACTTCGG GCCTTTCAAC TTCCCTTCAG 006560 006561 GTCCTTCAAG GCTCAGATCT GGAGCATTAG TATCTACTTT TGGTGCAGAA ATGTCCACAT TCGCTTTGGA CAGGTTCACA 006640 006641 TCAAATTCTG GCCCCTCTCC TTTGAGGCTG GGCATGCTAA ATTTGGGCAT TTTAATCTTT GGCATCTTCA AGTTCCAGTC 006720 006721 AGGACCCTGC ATTTCAACAT CTGGGGCACT GACATCTACT TTTGGGCCTT TCAGGTCCCC TTCCAGCTTT GGCACTGTCA 006800 006801 TATCATATTC TCCCTTTACT TTAGGACCTT TCATATGCAA GTCCACATCA GGCATGGAGA TCTTGGGGGC CTTGATATTC 006880 006881 ATCTCTGGCA TCTTGAACTT GGGGCCCTTC AGCTTTCCTT CAGGTCCTTC AATATTCACA TCTGGAACTT CAACACCCAC 006960 006961 CTTGGGTCCT GAGATGTCCA CATCAGCCTT GGGCAGGTTC ACATCCACTT CTGGGCCCTC TGCTTTGAAG CCAGGCATGC 007040 007041 TGAACTTGGG CATTTTCATC TTGGGCATCT TCAGGTGCCA GTCTGGGCCT TGAACCTCCA CATCTGGGAC ATCAATGTCC 007120 007121 ATTTTGGCAC TTTTAAGTTC AACATCAGGA ACTTTAATCT CACTTTCAAC CTTTGGCATT GTGACATCAT ATTCTCCCTT 007200 007201 TACGTTAGGG CCTTTCAGAT GTAAGTCCAC ATCAGGCATG GAGATCTTGG GGACTTTGAT GTTCATCTCA GGCATCTTAA 007280 007281 ACTTGGGCCC TTTCAATTTC CCTTCTGGTT CCTCAATGCT CACATCAGGA GCAGTAACAT CTATCTTGGG CCCGGAAATG 007360 007361 TCCACATCAG CCTTGGGCAG GTTCACATCC ACTTCTGGGC CCTCTGCTTT GAACCCTGGC ACACTGAATT TGGGCATTTT 007440 007441 CATCTTGGGC ATCTTCAAGT GCCAGTCTGG GCCATGAACA TCCACATCTG GGGCATCAAT GTCCACTTTT GGGCCTTTGA 007520 007521 GTTCTCCTTC CAGCTTTGGT ACAGTTACAT CATACTCTCC CTTCACCTTT GTACCTTTCA CGTGCAAATC TACATCAGGC 007600 007601 ATGGAGATCT TTGGTGTCTT GACACTCATA TCAGGCAGCT TAACATCGGG GCCTTTAAGT TTTCCCCCCA GACCCTCCAA 007680 007681 GTTGACATCT GGGGCTTCCA CATTGACCTT GGGCCCTGAA ATACTGATAT CTCCTTTGGG TAGAGTCATA TGAACATCTG 007760 007761 GACCTTCCCC TTTGGCTCCT GGAGTGCTGA ACGTGGGCAT TTTCATCTTG GGCATTTTCA GGTTCCATTC TGGGCCATGC 007840 007841 GCTTCGACAT CTGGGGCACT GACATCCACT TTGGGGCCTC TGACATCAAC TTCAGGGACT TTGACTTTCC CTTCTACTCT 007920 007921 GGGGAGTGTG ACATCTACAC CCCCTTTCAC TTTAGGTGCG GCCACATTTA AGTCTACTTC TGACATAGAG ATCCTACAGG 008000 008001 TTCCGGTTTT CCCGGAAGGA CTGCCAAGCC TAGGGCCTGT CAAGGTTCCC TCTAGGTTTG GTGTCTCTAT GTCCACTCTG 008080 008081 GAGCCTTTAA GTGCCACTTG AGGGCCTTTA ACATCACCTT GCACCCCAGG AGCAGAAACC TTAATATCTC CTTTCAGTTT 008160 008161 AGG |
Predicted Small Protein
Name | NONHSAT021754_smProtein_1526:1666 |
Length | 47 |
Molecular weight | 5133.7465 |
Aromaticity | 0.0434782608696 |
Instability index | 60.1282608696 |
Isoelectric point | 4.83477783203 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.028705175764 |
Amino acid sequence | MLLFQIHFPSDLEAQTHSAQEPGVQSDLLSHLLPPLVLRNEGPQQT |
Secondary structure | LEEEEEELLLLHHHLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |