NONHSAT021864
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021864 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
539 nt |
Genomic location |
chr11+:62655342..62655992 |
Exon number |
2 |
Exons |
62655342..62655690,62655803..62655992 |
Genome context |
|
Sequence |
000001 gcaagctcaa actcctgggt tcaagtgatc ctccctcctc agcctcccca gtatctggga ctatagggat gtaacactac 000080
000081 acccagctaa tttttaaaaa ttttgtagta gagatgaggg ctcattatgt tgctgaggct ggtttcaaat gcctgggctc 000160 000161 aagcaatcct cttggccttg acctcccaga ctgctggaat tacagatgtg agccaccatg cctgaccCCA GGCCTTTTTA 000240 000241 AAGTCCTATT TTCTCTGCTT TTCAGCCTAT GGAGGCTCCA GTCATGCTGT GGGATGAGTC CAGCTTCCCT GACATCCCAG 000320 000321 GGGCTGTAAG TGCCAACATG ACTGTGAAGG GCCAGAGTGA AGACCCTGGC TCCCTCCTTT CCTTGTTCCG GCGGCTGAGT 000400 000401 GACCAGCGGA GTAAGGAGCG CTCCCTACTG CATGGGGACT TCCACGCGTT CTCCGCTGGG CCTGGACTCT TCTCCTATAT 000480 000481 CCGCCACTGG GACCAGAATG AGCGTTTTCT GGTAGTGCTT AACTTTGGGG ATGTGGGCC |
Predicted Small Protein
Name | NONHSAT021864_smProtein_113:328 |
Length | 72 |
Molecular weight | 7799.0811 |
Aromaticity | 0.112676056338 |
Instability index | 61.3084507042 |
Isoelectric point | 7.57989501953 |
Runs | 7 |
Runs residual | 0.0499629355078 |
Runs probability | 0.0185731950438 |
Amino acid sequence | MRAHYVAEAGFKCLGSSNPLGLDLPDCWNYRCEPPCLTPGLFKVLFSLLFSLWRLQSCCG MSPASLTSQGL |
Secondary structure | LLLHHHHHHLLEELLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLL LLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLL LLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooo ooooooooooo |