NONHSAT021922
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021922 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
929 nt |
Genomic location |
chr11+:63719841..63722189 |
Exon number |
3 |
Exons |
63719841..63720311,63721444..63721521,63721810..63722189 |
Genome context |
|
Sequence |
000001 TCGCAGCTTT CCCGTCTGAC TGCTCCCAAA TTCCCCAGGT ATGAGCAGAG CGAGTGGGGC TGGAAGGACC GAGAGAAACG 000080
000081 GGAGGAAATG ACAGATGACC GAGCCTGGTA CCTCATCGCG TGGGAAAACA GCTCCGTCCC TGTTGCCTTT TCTCACTTCC 000160 000161 GGTTTGACGT GGAGTGTGGG GATGAAGTCC TGTACTGGTA GGAGCCATGG CTTGGGGGAG GTAGGGGAGA GAGACCCTGG 000240 000241 CGATGTTCCA GGCACTCCAG CCAGGTGACA AAGCCCCTGG ACCTACCTAG GTCTATGAGC TGCCAAGGAC TGCAAGCTCC 000320 000321 TCTGCCAGAC CTTACAGCCT CTTCATGTCC CATCCTGCAC GCTCACCTCT CTGCTTTCTT CACCTAGCTA TGAAGTGCAG 000400 000401 TTGGAAAGCA AGGTGCGGCG GAAAGGCCTG GGGAAGTTCC TCATACAGAT CCTGCAGCTC ATGGCCAACA GCACACAGAT 000480 000481 GAAGAAGGTT ATGTTAACAG TATTTAAACA CAATCATGGT GCCTACCAGT TCTTCAGAGA AGCGTTGCAA TTTGAAATTG 000560 000561 ATGACTCTTC CCCCAGCATG TCCGGTTGCT GTGGGGAGGA TTGCTCCTAT GAGATCCTGA GCCGGAGGAC CAAGTTTGGG 000640 000641 GACAGCCATC ACTCCCACGC GGGTGGGCAC TGTGGTGGCT GCTGCCACTG AACTCTCAGA GCCACTTTCA AGTCACAATG 000720 000721 CTCTCTCCTA AGGCCTTTCC TCTTTCCTGG TCTCACTGTT CACCGGGTGT CCTCAGAGCT GTGGCCTCCC CAGCCCTGCA 000800 000801 CGTGCCAGGC TGCGCCCTGA GAGCACAGAA CCCTGGGGAG AAGTGGTATC AGCTGCTCCT CCTCTCCTAG GAGACCAGAG 000880 000881 TGCTAGAAGG GAATGAAAGG GAGAGGGAAG AGTAGGTGGG GCCGGGCAG |
Predicted Small Protein
Name | NONHSAT021922_smProtein_344:481 |
Length | 46 |
Molecular weight | 5024.7946 |
Aromaticity | 0.111111111111 |
Instability index | 65.4666666667 |
Isoelectric point | 10.1054077148 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0226613167789 |
Amino acid sequence | MSHPARSPLCFLHLAMKCSWKARCGGKAWGSSSYRSCSSWPTAHR |
Secondary structure | LLLLLLLLHHHHHHHHLLLEEELLLLEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |