NONHSAT022024

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT022024

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2274 nt

Genomic location

chr11+:64546318..64548591

Exon number

1

Exons

64546318..64548591

Genome context

Sequence
000001 CTCATTGGCT GCGGTGGTGG ACTCAATCAA TCTCGCCTGC GTTGTAGTGT CGCGGGATTG GCTGTCGCTG GTTCCAGCCT 000080
000081 TTTTCTACTC CCCTCCCCCA GGGGGCAGTT TCTCCGGGAT TAAGCGAGAG TCGCGGCGGA AAAGGCCCAG CCGGAACGAG 000160
000161 ATTTACGGCG GGGGAGTCCT GGAGCAGGAA GTGCGCATGC GTAGATGGAG CAAAACCGCC TCTCCACCCG TCTCCCTTCA 000240
000241 CCATCGACCC TTGGGTCCAG CAAGGAAGCC CTAAGTGACG TCAACCTTTG TTCCCATGGT AACGCAGAAC CTTGGGGCGG 000320
000321 GAGCAGGGGA GGGGCTGGCG CGCGCCGGAA AACCGGCTCA GTTGACGCTG CAGGTAAAAA GACTTCCTGT TTTTTTGGaa 000400
000401 aaaaaaaaaa aaaaaaaaaG TGACCCAAAA AGCTACGAAT AGAGACGACT TATCGAAGGA TTTAAAACAG TATTTGAACT 000480
000481 GATGCAACAA CATATTAGAT GAAAGGTAAC AGAAGGTTGT CAGTTCAAAA ATTACAAATA CACACTTCTA TTGGAATCTC 000560
000561 CACGGAGTTC AGAGGATTTA ATTAAATGAT CTTAAAATCG TATAAAACAA TAACTACggc cgggcgcggt ggctcacgcc 000640
000641 tgtaatccca gcactttgac aggccgaggc gggcgaatca caaggtcaga aggtcgagac cagcctgacc aacatggcga 000720
000721 aaccccgtct ctacgaaaaa tacaaaaatt agttgggtgt agtggtgcac tcctgcaatc ccagcttccc aggaggatga 000800
000801 ggcaagagaa tcgcttgaac ccgggaggcg gaggttgcag tgagccgaga tggggccact gcacttcagc ctgggtgaca 000880
000881 gagcgagact gtcaaaaata aaaataaaaa taaCTACTAC AGTACTGGGA AAACTTTACA AGACGGAGCA GGAGCTTGCC 000960
000961 TTTCCAGATG ACAAACATAG TATATAAAAC ACAATAGGCC AGTGCCAAGG CACtgggagg ccaaggcggg gggatcacct 001040
001041 gaggtcagga gttcgagacc aacctgacca acacggtgaa acccccgtct ctactaaaag tacaaaaatt agccgagcgt 001120
001121 ggtggcagac gcctataatc ccagcttctc aggaggctga ggcaggagaa ttgcttgaac ccaggaggcg gaggtgtagt 001200
001201 gagctgagat cgcaccactg tactccagcc tgggcaacag catgagactc cgtctcaaaa acaaaaaacc acaataataa 001280
001281 aacaaTATGA TATTGTTGGT AGGAAAGACA CATTAGTGCA ACAGAATCCG GAAATACCAC AAATGTAGTA TTTTATTTCA 001360
001361 ATCAGGAAAA GATGATTTCG TTGATAAATG GCGTAGAATC TTAAATTTAA ACAACAAAAC ATTTAGAATA TAATTTAGGA 001440
001441 GACTATAAGG GTATTCTAGG GGTTGAGAGA CTGCAAAGAC AGGAACCTCA AACTGTAAAA AGATATACTT GATTACCCCG 001520
001521 AAAATTAACA CTGATAaaag tcaagagaca atgatagatg aggaaaaaat atttgccata catgataaag agccaatacc 001600
001601 tgtaatatac aaatacatct taaaaactaa ttagaaaaaa ggcaaaaaca atagaaaatg agcaaaaaat aggaatggac 001680
001681 atgtctcaga agaacaaatc caaatagcca agaaatatga aagggtgcac aaccccTCTG CTGTGGTTTT TTAAAATAAA 001760
001761 TAGAAAAGAT GTTGGAACCC CCACAACACT TGAAACCTGG AGAGAGAGGT GACTGTGATC TCAGCCATgt atggttataa 001840
001841 ttttttctga gataataaat tagacctgct tgtttttctt gttctgtaca attattggag agaattaaac atgggacaaa 001920
001921 aacctgctgc cttcttaatg acccttctta tagataactt cccttttgtt gtcctgcttt acttagacca gatgacagca 002000
002001 aacccatgac tattacaccc tctgtaaaaa atgttaaatg tatgcctccc aaaaagaaac actgcttaca accaaattat 002080
002081 ttattattat tatttcaatt tgagacagag tctggctctg tcgcccaggc tggagtgcaa tggcacaatc tcggctcact 002160
002161 gcaccctctg cctcccagat tcaagcgatt ctcccacctc agcctcctga gtagccggga ttacagccac ctgccatcat 002240
002241 gcccagctaa ttgttacatt tttgtaaaga tgga
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Predicted Small Protein

Name NONHSAT022024_smProtein_2030:2209
Length 60
Molecular weight 6619.4739
Aromaticity 0.101694915254
Instability index 77.7186440678
Isoelectric point 7.65863037109
Runs 9
Runs residual 0.0080858342404
Runs probability 0.0240338377593
Amino acid sequence MLNVCLPKRNTAYNQIIYYYYFNLRQSLALSPRLECNGTISAHCTLCLPDSSDSPTSAS
Secondary structure LLLEELLLLLLHHHHHHHHHHHHHHHHHHLLLLEELLLEEEEEEEELLLLLLLLLLLLL
PRMN -
PiMo -