NONHSAT022078

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT022078

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

801 nt

Genomic location

chr11+:64885782..64886583

Exon number

1

Exons

64885782..64886583

Genome context

Sequence
000001 GGTGCTTGTA GTCCCAGCTA CTCCTGAGGC TGAGGCAGGG GAATCGCTTG AACCCGGGAG GTGGAGGCTG CAGTTAGCCG 000080
000081 AGATCGCGCC ACCGNTCTCC AGCCTGCGAG CCTGGGCCAC AGAGAGAAAC TCCACCTCAA AAAGATAAAT AGAAAGCAGC 000160
000161 ATTTAAGAAA TATCTGAGCT CCTATGATTT TTTTCCTCCA AAACTGCCTC TTCTTTTCAT TAAGTATCTT CTCATTAAAT 000240
000241 ACCACTATTC ATCCATCTTA TTAAGTGCAG GCCCCATTCT AGGTGCCAAG AACACAATGC ACATCAAAGG GAGCCGGGGG 000320
000321 TCCCTGTTCT AATAGAGCTC ACTCTTGTGG TGGAGTGGGG GGTGTGATGA ACCAAACTGT GAGTGTTCTT TGCATCCCTG 000400
000401 CTACTACTGG TGGTCTAAGC TTCCTGACCC CTCATGTGGA TGACAACACA TTAAGTGTTT TTCCTAACTT TCTTGCCAGC 000480
000481 CCTCCAGAAA AACCTGCCAG AGAAATTAGA TCACAAGTCA GATGAGATCC ATCTGTTACT CAAAACCCTT CTGCGACCCT 000560
000561 CCATTGCACT TGGACTCAAA CCCAAACTCC TCTCTATGGC TGACAAGGCC TTGCAGGATC TGCCCGCCCC CAGCCCTAGA 000640
000641 CATCACCTCT TCCCATCTTC ACACAGTCCT CTAGGCTTGA AATATTCCCC TACCTGATCA CTTGACTGGG TCATCTCAGG 000720
000721 TCTCACTCAC GTCATTTAAA CAGGACCTCT CGGCTGGCAC AGCGGCTGAC ACCTGTAATC TTCAACACTT TGGGAGGGCA 000800
000801 A
[back to top]

Predicted Small Protein

Name NONHSAT022078_smProtein_521:673
Length 51
Molecular weight 5631.5138
Aromaticity 0.06
Instability index 61.556
Isoelectric point 7.72479248047
Runs 7
Runs residual 0.0246783625731
Runs probability 0.00475685769802
Amino acid sequence MRSICYSKPFCDPPLHLDSNPNSSLWLTRPCRICPPPALDITSSHLHTVL
Secondary structure LLEEEELLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLHHHLLL
PRMN -
PiMo -