NONHSAT022312

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT022312

Source

NONCODE4.0

Same with

,

Classification

sense

Length

572 nt

Genomic location

chr11+:66290322..66290983

Exon number

2

Exons

66290322..66290836,66290927..66290983

Genome context

Sequence
000001 aaataacagg taagggtgat caggaacacc tctctgtgga gatggcttga aagttaaaaa ggaaccagtt ggtgagaaag 000080
000081 tcgggaagag tgttgtaggc CAACTCAAAG TGGGAAAGAC ATTGGCGTGT GCTCCTCGAA TAGAGAGGAA CTAACTGTAC 000160
000161 TTTCTGGAAA GGGAAACTAA AATTGAGAGG CCAGTAAACT AAAAACTGCA TTGACACAGG GCAAAGCTCT TCATCCTTTT 000240
000241 CTCATAATAA AGTGCCTAAG TCCACTTGTC CTGGCTAGTC CAGCCAAAGG TAAACTCACT GAAAACTCTG TTAAATGCTA 000320
000321 GATGATCATA CAAGCCACCA TAGTGAAGGT GGGCGGAAGA CAAGACACCA TAGTGAAGGT GGGAGGAAGA CAAGACACCA 000400
000401 TAGTGAAGGT GGGAGGAAGA CACACTTGAT Gttttccaag gccacacatt tactaaggtg gcagaagtgg aaataatccc 000480
000481 agggtcatct gctttggggc cagtgttcct cccaGAGACT CCAAGCACCC CAAGTACTGC ATCGAGCTGA GCGCCCAGCC 000560
000561 TGTGGGACTT AT
[back to top]

Predicted Small Protein

Name NONHSAT022312_smProtein_314:475
Length 54
Molecular weight 6292.9707
Aromaticity 0.0566037735849
Instability index 47.9849056604
Isoelectric point 11.0000610352
Runs 10
Runs residual 0.0284169351127
Runs probability 0.0320173114291
Amino acid sequence MLDDHTSHHSEGGRKTRHHSEGGRKTRHHSEGGRKTHLMFSKATHLLRWQKWK
Secondary structure LLLLLLLLLLLLLLELEELLLLLLEEEELLLLLLEEEEEHHHHHHHHHHHHLL
PRMN -
PiMo -