NONHSAT022390

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT022390

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2009 nt

Genomic location

chr11+:67065362..67069954

Exon number

2

Exons

67065362..67067092,67069677..67069954

Genome context

Sequence
000001 tttattattt gagacgttgg ctatttagga gtgtgttgtt tactttctac atatttgtga atttccaaag tttttttttt 000080
000081 ctgctattga cttctaattt cattccattg tggttggaaa acatacattg tatgacttct atcctttcaa ttttattgag 000160
000161 gttttctttt tttttttttt tttttttttt tgagacggag tctcgctctg tcgcccaggc tggagtgcag tggtactgtc 000240
000241 tgctcactgc gagctctgcc tccgatgttc acgccattct cctgcctcag cctcccaagt aggtgggact acaggcgtcc 000320
000321 accaccgtgc ccggctaatt ttttgtattt tttagtagag acggggtttc atcatgtttg ccaggatggt ctcgatctcc 000400
000401 tgacctcatg atccaccccc cttggcttcc caaactgctg ggattacagg catgagccac cgcgcccgga cttattgagg 000480
000481 ttttcttaat ggcctagtgt atggccttga agagtgttcc gtgtgcgcgt gagaagcgtg tgtgtggttg ttattgggta 000560
000561 gagtgttcta gcctgcttat gaagtccagc tgtagtgttg ttcttatctt ctggttcttt gttgatcttc tagttgttct 000640
000641 atcccttatt gaaagtgggg tactggagtc tccaactGAC ATACTTTTCT TTTAGCtttt tattttggaa aatttcaaac 000720
000721 atatatgaaa gaagagataa tgtacttact catcacccag cttcaacatt tatcaacatc ttgccaatct tactgaatct 000800
000801 atccttcctt acctttttta aaaatgtttc ctagagtgtg tcaaagctca tcccagatgt cctaatgttt ctagtaaatg 000880
000881 cttctgcaca attctaaaag acaaggatgt ttttaaaccc agccccgaca ctatcatacc tcacaagatt catgctaatt 000960
000961 cctcagtgtc ttctagtccc aagtccatgc tcaagtgtcc CCCCCTGTCC AGGCACCCTC TTCAGGGGTC CTCCATGTTT 001040
001041 CATAGCGAGA AGGGGCCCTG AGAGTTGGGC ACCCCGGGCA GGCTGGCTGG AGGGGGCTTT GGAAAGGAAG GCTTTGGCCA 001120
001121 GCGTGTGAGG GTGCAGGTCT CACCAGCTCC TGTTTGGTCT GTTTCAGGAA CAAATGTGGT ATCTGGGGCT GGCGGTCTGA 001200
001201 GAAGATGGAA ACTGTTAGCG GCTACGAGGC CAAGGCAGGA GAGGCTAGGG GTGGGGGGCT GGGGGTAGGA GATGAGGTCC 001280
001281 AGGAACTCAG CTCCTCTCCA CATCCATCCC AGAGTAGCCC CTGGGCTCTG GAAACCCTGA GCATTTGTGG GAACTCAGCG 001360
001361 GGCCTGAGTG CCCAGCCCCT GCGGAGTACA CAGGGCTCAC CCACATCATG GGCCCCTACC CAGGGTACCG AGATCAAAAG 001440
001441 AGGAGTGTGT TCCTCTTGAC CCTGGGGCTG CATCTCCTCG TTGGTGACTT CCTGGGGTTC AGACCCTGCC ACCTCCTCCA 001520
001521 TTTTGGGGAG CAAGATCTCA TCTGTCTCTG GGACAGGAGG ACCTGGGTTC TGCACTGGTG AGGCTGAGTG TGGGGAGCAG 001600
001601 GCTCTGAGCC CCCAGCTCCC CGTGTCCCCT GCTCCCCAGG TGTACAGTGC CACCAACGTG GAGCTGGTGA CACGCACACG 001680
001681 CACGGAGCAC CTCTCTGATC AGGACAAGTC GAGGAGCAAA GGTAAACCCA GCTTTGAAGA GCAGCTGCGC CTGGCCCTGG 001760
001761 AGTTGTCTTC ACGGGAGCAG GAGGAGCGGG AGCGGCGCGG GCAGCAGGAG GAGGAGGACT TACAGCGGAT CCTGCAGCTG 001840
001841 TCACTCACTG AGCACTGAGC CATAGCCCCG GGAGGGCTGG CCAGGCCACT CCCTGCCCGC TTTTGTAATT TATTTATTTA 001920
001921 TAAACTCTCT GCTGCTGAGC TTGGGGCCTG GAGCCCCAGG AATGAGCAGG CAGGGGAGAC TGAGATGGAA ATAAAGAGAC 002000
002001 TGTCGCAGC
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Predicted Small Protein

Name NONHSAT022390_smProtein_500:694
Length 65
Molecular weight 7209.6191
Aromaticity 0.125
Instability index 52.8125
Isoelectric point 5.05194091797
Runs 10
Runs residual 0.00765625
Runs probability 0.0393216746157
Amino acid sequence MALKSVPCAREKRVCGCYWVECSSLLMKSSCSVVLIFWFFVDLLVVLSLIESGVLESPTD
ILFF
Secondary structure LLLLLLLLLLLLLEEEEEEEEHHHHEEELLLLEEEEHHHHHHHHHHHHHHHLLLLLLLLL
EEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
LLLL
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