NONHSAT022390
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT022390 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2009 nt |
Genomic location |
chr11+:67065362..67069954 |
Exon number |
2 |
Exons |
67065362..67067092,67069677..67069954 |
Genome context |
|
Sequence |
000001 tttattattt gagacgttgg ctatttagga gtgtgttgtt tactttctac atatttgtga atttccaaag tttttttttt 000080
000081 ctgctattga cttctaattt cattccattg tggttggaaa acatacattg tatgacttct atcctttcaa ttttattgag 000160 000161 gttttctttt tttttttttt tttttttttt tgagacggag tctcgctctg tcgcccaggc tggagtgcag tggtactgtc 000240 000241 tgctcactgc gagctctgcc tccgatgttc acgccattct cctgcctcag cctcccaagt aggtgggact acaggcgtcc 000320 000321 accaccgtgc ccggctaatt ttttgtattt tttagtagag acggggtttc atcatgtttg ccaggatggt ctcgatctcc 000400 000401 tgacctcatg atccaccccc cttggcttcc caaactgctg ggattacagg catgagccac cgcgcccgga cttattgagg 000480 000481 ttttcttaat ggcctagtgt atggccttga agagtgttcc gtgtgcgcgt gagaagcgtg tgtgtggttg ttattgggta 000560 000561 gagtgttcta gcctgcttat gaagtccagc tgtagtgttg ttcttatctt ctggttcttt gttgatcttc tagttgttct 000640 000641 atcccttatt gaaagtgggg tactggagtc tccaactGAC ATACTTTTCT TTTAGCtttt tattttggaa aatttcaaac 000720 000721 atatatgaaa gaagagataa tgtacttact catcacccag cttcaacatt tatcaacatc ttgccaatct tactgaatct 000800 000801 atccttcctt acctttttta aaaatgtttc ctagagtgtg tcaaagctca tcccagatgt cctaatgttt ctagtaaatg 000880 000881 cttctgcaca attctaaaag acaaggatgt ttttaaaccc agccccgaca ctatcatacc tcacaagatt catgctaatt 000960 000961 cctcagtgtc ttctagtccc aagtccatgc tcaagtgtcc CCCCCTGTCC AGGCACCCTC TTCAGGGGTC CTCCATGTTT 001040 001041 CATAGCGAGA AGGGGCCCTG AGAGTTGGGC ACCCCGGGCA GGCTGGCTGG AGGGGGCTTT GGAAAGGAAG GCTTTGGCCA 001120 001121 GCGTGTGAGG GTGCAGGTCT CACCAGCTCC TGTTTGGTCT GTTTCAGGAA CAAATGTGGT ATCTGGGGCT GGCGGTCTGA 001200 001201 GAAGATGGAA ACTGTTAGCG GCTACGAGGC CAAGGCAGGA GAGGCTAGGG GTGGGGGGCT GGGGGTAGGA GATGAGGTCC 001280 001281 AGGAACTCAG CTCCTCTCCA CATCCATCCC AGAGTAGCCC CTGGGCTCTG GAAACCCTGA GCATTTGTGG GAACTCAGCG 001360 001361 GGCCTGAGTG CCCAGCCCCT GCGGAGTACA CAGGGCTCAC CCACATCATG GGCCCCTACC CAGGGTACCG AGATCAAAAG 001440 001441 AGGAGTGTGT TCCTCTTGAC CCTGGGGCTG CATCTCCTCG TTGGTGACTT CCTGGGGTTC AGACCCTGCC ACCTCCTCCA 001520 001521 TTTTGGGGAG CAAGATCTCA TCTGTCTCTG GGACAGGAGG ACCTGGGTTC TGCACTGGTG AGGCTGAGTG TGGGGAGCAG 001600 001601 GCTCTGAGCC CCCAGCTCCC CGTGTCCCCT GCTCCCCAGG TGTACAGTGC CACCAACGTG GAGCTGGTGA CACGCACACG 001680 001681 CACGGAGCAC CTCTCTGATC AGGACAAGTC GAGGAGCAAA GGTAAACCCA GCTTTGAAGA GCAGCTGCGC CTGGCCCTGG 001760 001761 AGTTGTCTTC ACGGGAGCAG GAGGAGCGGG AGCGGCGCGG GCAGCAGGAG GAGGAGGACT TACAGCGGAT CCTGCAGCTG 001840 001841 TCACTCACTG AGCACTGAGC CATAGCCCCG GGAGGGCTGG CCAGGCCACT CCCTGCCCGC TTTTGTAATT TATTTATTTA 001920 001921 TAAACTCTCT GCTGCTGAGC TTGGGGCCTG GAGCCCCAGG AATGAGCAGG CAGGGGAGAC TGAGATGGAA ATAAAGAGAC 002000 002001 TGTCGCAGC |
Predicted Small Protein
Name | NONHSAT022390_smProtein_500:694 |
Length | 65 |
Molecular weight | 7209.6191 |
Aromaticity | 0.125 |
Instability index | 52.8125 |
Isoelectric point | 5.05194091797 |
Runs | 10 |
Runs residual | 0.00765625 |
Runs probability | 0.0393216746157 |
Amino acid sequence | MALKSVPCAREKRVCGCYWVECSSLLMKSSCSVVLIFWFFVDLLVVLSLIESGVLESPTD ILFF |
Secondary structure | LLLLLLLLLLLLLEEEEEEEEHHHHEEELLLLEEEEHHHHHHHHHHHHHHHLLLLLLLLL EEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL LLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooooooooo oooo |