NONHSAT022391

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT022391

Source

NONCODE4.0

Same with

,

Classification

sense

Length

609 nt

Genomic location

chr11+:67067501..67068599

Exon number

2

Exons

67067501..67067970,67068461..67068599

Genome context

Sequence
000001 CAGCCATCTC CCCTGAGGAG TACTTCGACC CCAACTTCAG CCTGGAGTCA CGGAACATTG GCCGCCCCAT CGAGATGTCC 000080
000081 AGCAAAGTAC AGAGGTGAGG TCTGAGAGCT GGCTGGGGAC TTGCCTCGGG ACAAGGGCTC TTGCAGACCC CTCTCTGGGC 000160
000161 CTGTCATAGT TAGGGACCCA CTCCCTCGGc tggcttctct ctggactcca ctcctggagg gcaggagtca tgtctgcctt 000240
000241 atccatggtc ctcagccctt agcaaggggc ttggcacaga aaaccggtag tttgtctttg atgaatggat gGTGCCACCC 000320
000321 ATGTATGGTT TTCTATTGAA TTTCATGAGT ACCTGCTGGG GCCAGCGTGG CACAGTGGGA AGGGCCCCCA GCGACGTGGC 000400
000401 CTGGGAGTGG AGCGTCTGCC TTGGTGGAAC AGAACAGTTA CGCTCTTGCC TCGTGAGGAG CCTTGAGCAG GTTCAAGGCA 000480
000481 ACACTGTGGC TGAGTGAAGA GCACCCGCTC TCCCTGGGTG ACCAGGTGAC CCCCATCATC GACCTAATGG CCATCAGCAA 000560
000561 CGCTCACTTT GCCAAGCTGC GCGACTTCAT CACTCTGCGC CTTCCACCT
[back to top]

Predicted Small Protein

Name NONHSAT022391_smProtein_308:496
Length 63
Molecular weight 6850.7938
Aromaticity 0.0967741935484
Instability index 58.5129032258
Isoelectric point 5.15484619141
Runs 11
Runs residual 0.0237788018433
Runs probability 0.0397054808819
Amino acid sequence MVPPMYGFLLNFMSTCWGQRGTVGRAPSDVAWEWSVCLGGTEQLRSCLVRSLEQVQGNTV
AE
Secondary structure LLLLLLHHHHHHHHLLLLLLLEEEELLLLEEEEEEEELLLLHHHHHHHHHHHHHHLLLEE
LL
PRMN -
PiMo -