NONHSAT022401
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT022401 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
860 nt |
Genomic location |
chr11-:67119019..67120549 |
Exon number |
2 |
Exons |
67119019..67119490,67120162..67120549 |
Genome context |
|
Sequence |
000001 GGGGAGGAGC CCCAGCCCCG CGACGAGGAG GAAGCGGAGC TGGAGCTGCT GAGGCAGTTT GACCTGGCCT GGCAGTACGG 000080
000081 GCCCTGCACC GGTGAGAACC CACCCAGCCC CACGGAGGCG CCTCTCCCAG CCAGTCACCC ACACGTCTCT GAAGTCACCC 000160 000161 AAGCGCTTGC GTGACTCTGA CCCTCAGGAA CTGTCTCCCC CCAACACACA CATTCTCCAG CTCAGACTCT ACCCCACCCC 000240 000241 CCACAAGTCT CCAGAGTCTT CTTCCCACCC TGGCAGGGAT CACACGGCTG CAGCGCTGGT GTCGGGCCAA GCAGATGGGC 000320 000321 TTGGAGCCTC CCCCAGAGGT GTGGCAGGTG CTGAAGACCC ACCCCGGAGA CCCCCGCTTC CAGTGCAGTC TCTGGCATCT 000400 000401 CTATCCCCTA TGAGGCACCA CGTAAGACCT CCTGCCCTTA GCTCTCTTGC TCACCACCCA AGAACCTCAG GACAGAAGCG 000480 000481 AGAGCCCATT GCTCCTGCTC AGCTCAGCCC GGCTGCGGAG GAACCCTTGG CAGGCAGAAC CTGGAGGTGT CAGAGGCTCA 000560 000561 ACTCCTCCAT CTAACCAGCA GGCTCCCAGA GTCCCCGGAA GAGCCTGCGC AGCTGAAGCA GAGTGCTTCT AGATGGAGAG 000640 000641 TGGTCACTGG GGAAAAGGAC CTGGCCATCA CCTTCCAATA CCTGCTGCCT GTCTCCCTGA CCCATGATCT GGCAAGTTAG 000720 000721 GCACAGTCAG ACATGGACAG TTGATCCATG AGGAAAAGAT GCTCTCCCAC CTAAGGCCAG GAATCTGAGA GCAGGACTGG 000800 000801 CTGAGCTCCC AGGGCAAGGG GTTCACTAAT GCTTATCAAT AAAGAATATT GAGCCTGGAA |
Predicted Small Protein
Name | NONHSAT022401_smProtein_314:412 |
Length | 33 |
Molecular weight | 3772.3564 |
Aromaticity | 0.125 |
Instability index | 41.209375 |
Isoelectric point | 5.96954345703 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0498321851263 |
Amino acid sequence | MGLEPPPEVWQVLKTHPGDPRFQCSLWHLYPL |
Secondary structure | LLLLLLHHHHHHHHLLLLLLLLEELLLLLLLL |
PRMN | - |
PiMo | - |